SDCSearchResults
type: Bundle
node role: treeRoot
id:
  v: SDCSearchResults
type:
  v: searchset
total:
  v: 1
link:
  relation:
    v: self
  url:
    v: https://example.nhs.uk/FHIR/R4/Questionnaire
entry:
  full url:
    v: http://example.org/fhir/Questionnaire/GenomicTestOrder
  resource: GenomicTestOrder
  search:
    mode:
      v: match

GenomicTestOrder
type: Questionnaire
id:
  v: GenomicTestOrder
meta:
  profile:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/NWQuestionnaire
    link: https://fhir.nwgenomics.nhs.uk/StructureDefinition/NWQuestionnaire
text:
  status:
    v: generated
  div: Generated Narrative: Questionnaire GenomicTestOrder Profile: Questionnaire Structure LinkID Text Cardinality Type Description & Constraints<img src="[binary]" alt="doco" style="background-color: inherit"/> The aim of this is to support conversion of multiple Genomic Order Forms from several NHS Trusts to HL7 v2 and/or FHIR. Questionnaire https://fhir.nwgenomics.nhs.uk/Questionnaire/GenomicTestOrder #xD; Patient Patient 0..1 group Definition: Patient #xD; LN/45394-4 Patient surname 1..1 string Definition: Patient.name.family #xD; LN/45392-8 Patient first name 1..1 string Definition: Patient.name.given #xD; LN/21112-8 Date of birth 1..1 date Definition: Patient.birthDate #xD; LN/81954-0 Date of death 0..1 date Definition: Patient.deceasedDateTime #xD; LN/56799-0 Address 0..1 group Definition: Patient.address #xD; HL7/PID-11-1 Address Line 0..* string Definition: Patient.address.line #xD; HL7/PID-11-3 City 0..1 string Definition: Patient.address.city #xD; LN/45401-7 Postcode 0..1 string Definition: Patient.address.postalCode #xD; LN/46098-0 Sex registered at birth 0..1 choice Definition: Patient.gender Value Set: AdministrativeGender #xD; LN/32624-9 Ethnic Category 0..1 choice Definition: Patient.extension:ethnicCategory Value Set: Ethnicity #xD; LN/89061-6 NHS Number 0..1 string Definition: Patient.identifier:nhsNumber #xD; LN/76435-7 Hospital Number (Medical Record Number) 1..1 string Definition: Patient.identifier:MedicalRecordNumber #xD; LN/56797-4 Account Number (Episode or Stay Number) 0..1 string Definition: ServiceRequest.encounter.identifier.value #xD; LN/56797-4-designNote PV1-19 (also known as stay number) 0..1 display #xD; ageAtCollection Age at collection (ignore for FHIR) 0..1 decimal #xD; LN/89009-5 Location 0..1 string Definition: Encounter.location #xD; HL7/PD1-3 GP Surgery (ODS Code) 0..1 choice Definition: Patient.generalPractitioner #xD; HealthcareProfessional Healthcare Professional 0..1 group Definition: PractitionerRole #xD; LN/18705-4 Referring …
url:
  v: https://fhir.nwgenomics.nhs.uk/Questionnaire/GenomicTestOrder
title:
  v: North West Genomics Test Order
status:
  v: draft
description:
  v: The aim of this is to support conversion of multiple Genomic Order Forms from several NHS Trusts to HL7 v2 and/or FHIR.
item:
  link id:
    v: Patient
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Patient#Patient
  text:
    v: Patient
  type:
    v: group
  item:
    link id:
      v: LN/45394-4
    definition:
      v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Patient#Patient.name.family
    code: https://loinc.org/rdf/45394-4
      system:
        v: http://loinc.org
      code:
        v: 45394-4
    text:
      v: Patient surname
    type:
      v: string
    required:
      v: true
  item:
    link id:
      v: LN/45392-8
    definition:
      v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Patient#Patient.name.given
    code: https://loinc.org/rdf/45392-8
      system:
        v: http://loinc.org
      code:
        v: 45392-8
    text:
      v: Patient first name
    type:
      v: string
    required:
      v: true
  item:
    link id:
      v: LN/21112-8
    definition:
      v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Patient#Patient.birthDate
    code: https://loinc.org/rdf/21112-8
      system:
        v: http://loinc.org
      code:
        v: 21112-8
    text:
      v: Date of birth
    type:
      v: date
    required:
      v: true
  item:
    link id:
      v: LN/81954-0
    definition:
      v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Patient#Patient.deceasedDateTime
    code: https://loinc.org/rdf/81954-0
      system:
        v: http://loinc.org
      code:
        v: 81954-0
    text:
      v: Date of death
    type:
      v: date
    required:
      v: false
  item:
    link id:
      v: LN/56799-0
    definition:
      v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Patient#Patient.address
    code: https://loinc.org/rdf/56799-0
      system:
        v: http://loinc.org
      code:
        v: 56799-0
    text:
      v: Address
    type:
      v: group
    item:
      link id:
        v: HL7/PID-11-1
      definition:
        v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Patient#Patient.address.line
      text:
        v: Address Line
      type:
        v: string
      repeats:
        v: true
    item:
      link id:
        v: HL7/PID-11-3
      definition:
        v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Patient#Patient.address.city
      text:
        v: City
      type:
        v: string
    item:
      link id:
        v: LN/45401-7
      definition:
        v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Patient#Patient.address.postalCode
      code: https://loinc.org/rdf/45401-7
      text:
        v: Postcode
      type:
        v: string
  item:
    link id:
      v: LN/46098-0
    definition:
      v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Patient#Patient.gender
    code: https://loinc.org/rdf/46098-0
      system:
        v: http://loinc.org
      code:
        v: 46098-0
    text:
      v: Sex registered at birth
    type:
      v: choice
    answer value set:
      v: http://hl7.org/fhir/ValueSet/administrative-gender
      link: http://hl7.org/fhir/ValueSet/administrative-gender
  item:
    link id:
      v: LN/32624-9
    definition:
      v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Patient#Patient.extension:ethnicCategory
    code: https://loinc.org/rdf/32624-9
      system:
        v: http://loinc.org
      code:
        v: 32624-9
    text:
      v: Ethnic Category
    type:
      v: choice
    answer value set:
      v: https://fhir.nwgenomics.nhs.uk/ValueSet/ethnicity
      link: https://fhir.nwgenomics.nhs.uk/ValueSet/ethnicity
  item:
    link id:
      v: LN/89061-6
    definition:
      v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Patient#Patient.identifier:nhsNumber
    code: https://loinc.org/rdf/89061-6
      system:
        v: http://loinc.org
      code:
        v: 89061-6
    text:
      v: NHS Number
    type:
      v: string
  item:
    link id:
      v: LN/76435-7
    definition:
      v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Patient#Patient.identifier:MedicalRecordNumber
    code: https://loinc.org/rdf/76435-7
      system:
        v: http://loinc.org
      code:
        v: 76435-7
    text:
      v: Hospital Number (Medical Record Number)
    type:
      v: string
    required:
      v: true
  item:
    link id:
      v: LN/56797-4
    code: https://loinc.org/rdf/56797-4

v: 45401-7

https://loinc.org/rdf/56797-4
system:
  v: http://loinc.org
code:
  v: 56797-4

v: Account Number (Episode or Stay Number)

v: string

v: false

extension:
  url:
    v: http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl
  value: CodeableConcept
    coding:
      system:
        v: http://hl7.org/fhir/questionnaire-item-control
      code:
        v: help
link id:
  v: LN/56797-4-designNote
text:
  v: PV1-19 (also known as stay number)
type:
  v: display

link id:
  v: ageAtCollection
text:
  v: Age at collection (ignore for FHIR)
type:
  v: decimal

link id:
  v: LN/89009-5
definition:
  v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Encounter#Encounter.location
text:
  v: Location
type:
  v: string

link id:
  v: HL7/PD1-3
definition:
  v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Patient#Patient.generalPractitioner
text:
  v: GP Surgery (ODS Code)
type:
  v: choice

link id:
  v: HealthcareProfessional
definition:
  v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/PractitionerRole#PractitionerRole
text:
  v: Healthcare Professional
type:
  v: group
item:
  link id:
    v: LN/18705-4
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/PractitionerRole#PractitionerRole.practitioner.display
  code: https://loinc.org/rdf/18705-4
    system:
      v: http://loinc.org
    code:
      v: 18705-4
  text:
    v: Referring Clinician Name
  type:
    v: string
  required:
    v: true
item:
  link id:
    v: LN/18707-0
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/PractitionerRole#PractitionerRole.specialty.coding.code
  code: https://loinc.org/rdf/18707-0
    system:
      v: http://loinc.org
    code:
      v: 18707-0
  text:
    v: Referring Clinician Current Speciality
  type:
    v: choice
  required:
    v: true
  answer value set:
    v: https://fhir.hl7.org.uk/ValueSet/UKCore-PracticeSettingCode
    link: https://fhir.hl7.org.uk/ValueSet/UKCore-PracticeSettingCode
item:
  link id:
    v: LN/46608-6
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/PractitionerRole#PractitionerRole.practitioner.identifier.value
  code: https://loinc.org/rdf/46608-6
    system:
      v: http://loinc.org
    code:
      v: 46608-6
  text:
    v: Referring Clinician Professional Identifier
  type:
    v: string
  required:
    v: true
item:
  link id:
    v: LN/89058-2
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/PractitionerRole#PractitionerRole.telecom.value
  code: https://loinc.org/rdf/89058-2
    system:
      v: http://loinc.org
    code:
      v: 89058-2
    display:
      v: Contact email address
  text:
    v: Email
  type:
    v: string
  repeats:
    v: true
item:
  link id:
    v: LN/81230-5
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/PractitionerRole#PractitionerRole.telecom.value
  code: https://loinc.org/rdf/81230-5
    system:
      v: http://loinc.org
    code:
      v: 81230-5
  text:
    v: Phone
  type:
    v: string
item:
  link id:
    v: HL7/ORC-21
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/PractitionerRole#PractitionerRole.organization.identifier.value
  text:
    v: Referring Organisation ODS Code / Ordering Facility
  type:
    v: string

link id:
  v: TestRequest
definition:
  v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/ServiceRequest#ServiceRequest
text:
  v: Test Request
type:
  v: group
item:
  link id:
    v: SNM/15220000
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/ServiceRequest#ServiceRequest.category
  code: http://snomed.info/id/15220000
    system:
      v: http://snomed.info/sct
    code:
      v: 15220000
    display:
      v: Laboratory test
  text:
    v: Test Category
  type:
    v: choice
  answer value set:
    v: https://fhir.nwgenomics.nhs.uk/ValueSet/order-category
    link: https://fhir.nwgenomics.nhs.uk/ValueSet/order-category
item:
  link id:
    v: HL7/OBR-4-r
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/ServiceRequest#ServiceRequest.code
  code: https://loinc.org/rdf/29300-1
    system:
      v: http://loinc.org
    code:
      v: 29300-1
  text:
    v: Test Code (Rare and inherited diseases)
  type:
    v: choice
  enable when:
    question:
      v: SNM/15220000
    operator:
      v: =
    answer: Coding
      system:
        v: https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA
      code:
        v: RareAndInheritedDiseasesGeneticTesting
  required:
    v: true
  repeats:
    v: true
  answer value set:
    v: https://fhir.nwgenomics.nhs.uk/ValueSet/GenomicRareAndInheritedDisease
    link: https://fhir.nwgenomics.nhs.uk/ValueSet/GenomicRareAndInheritedDisease
item:
  link id:
    v: HL7/OBR-4-h
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/ServiceRequest#ServiceRequest.code
  code: https://loinc.org/rdf/29300-1
    system:
      v: http://loinc.org
    code:
      v: 29300-1
  text:
    v: Test Code (Haemoglobinopathy)
  type:
    v: choice
  enable when:
    question:
      v: SNM/15220000
    operator:
      v: =
    answer: Coding
      system:
        v: https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA
      code:
        v: HaemoglobinopathyGeneticTesting
  required:
    v: true
  repeats:
    v: true
  answer option:
    value: Coding
      system:
        v: https://fhir.nhs.uk/CodeSystem/England-GenomicTestDirectory
      code:
        v: R361.1
      display:
        v: Sickle cell, thalassaemia and other haemoglobinopathies trait or carrier testing
  answer option:
    value: Coding
      system:
        v: https://fhir.nhs.uk/CodeSystem/England-GenomicTestDirectory
      code:
        v: R361.2
      display:
        v: Sickle cell, thalassaemia and other haemoglobinopathies trait or carrier testing
  answer option:
    value: Coding
      system:
        v: https://fhir.nhs.uk/CodeSystem/England-GenomicTestDirectory
      code:
        v: R372.1
      display:
        v: Newborn screening for sickle cell disease in a transfused baby
  answer option:
    value: Coding
      system:
        v: https://fhir.nhs.uk/CodeSystem/England-GenomicTestDirectory
      code:
        v: R93.1
      display:
        v: Sickle cell, thalassaemia and other haemoglobinopathies
  answer option:
    value: Coding
      system:
        v: https://fhir.nhs.uk/CodeSystem/England-GenomicTestDirectory
      code:
        v: R93.2
      display:
        v: Sickle cell, thalassaemia and other haemoglobinopathies
item:
  link id:
    v: HL7/OBR-4-c
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/ServiceRequest#ServiceRequest.code
  code: https://loinc.org/rdf/29300-1
    system:
      v: http://loinc.org
    code:
      v: 29300-1
  text:
    v: Test Code (Cancer)
  type:
    v: choice
  enable when:
    question:
      v: SNM/15220000
    operator:
      v: =
    answer: Coding
      system:
        v: https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA
      code:
        v: CancerGeneticTesting
  required:
    v: true
  repeats:
    v: true
  answer value set:
    v: https://fhir.nwgenomics.nhs.uk/ValueSet/GenomicCancer
    link: https://fhir.nwgenomics.nhs.uk/ValueSet/GenomicCancer
item:
  link id:
    v: pedigreeNumber
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Patient#Patient.identifier:PedigreeNumber
  text:
    v: G Number (Pedigree Number) - Order Group Number
  type:
    v: string
item:
  link id:
    v: LN/106194-4
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/ServiceRequest#ServiceRequest.identifier:PlacerOrderNumber
  code: https://loinc.org/rdf/106194-4
    system:
      v: http://loinc.org
    code:
      v: 106194-4
  text:
    v: Test request ID/Order ID
  type:
    v: string
  required:
    v: false
item:
  link id:
    v: LN/82768-3
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/ServiceRequest#ServiceRequest.priority
  code: https://loinc.org/rdf/82768-3
    system:
      v: http://loinc.org
    code:
      v: 82768-3
  text:
    v: Priority
  type:
    v: choice
  required:
    v: false
  answer value set:
    v: https://fhir.nwgenomics.nhs.uk/ValueSet/RequestPriority
    link: https://fhir.nwgenomics.nhs.uk/ValueSet/RequestPriority

link id:
  v: NOS/GeneticistEmail
definition:
  v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Observation#Observation.valueString
code:
  system:
    v: https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA
  code:
    v: GeneticistEmail
text:
  v: Clinical Geneticist email
type:
  v: string

link id:
  v: NOS/GeneticistDepartmentEmail
definition:
  v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Observation#Observation.valueString
code:
  system:
    v: https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA
  code:
    v: GeneticistDepartmentEmail
text:
  v: Clinical Geneticist department email
type:
  v: string

link id:
  v: Consent
text:
  v: Consent
type:
  v: group
item:
  link id:
    v: LN/19826-7
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Observation#Observation.valueCodeableConcept
  code: http://snomed.info/id/309370004
    system:
      v: http://snomed.info/sct
    code:
      v: 309370004
    display:
      v: Consent status
  code: https://loinc.org/rdf/19826-7
    system:
      v: http://loinc.org
    code:
      v: 19826-7
    display:
      v: Informed consent obtained
  code: https://loinc.org/rdf/59284-0
    system:
      v: http://loinc.org
    code:
      v: 59284-0
    display:
      v: Consent Document
  text:
    v: Has consent has been obtained for tests (Y/N)
  type:
    v: choice
  answer option:
    value: Coding
      type: LA33-6
      system:
        v: http://loinc.org
      code:
        v: LA33-6
      display:
        v: Yes
  answer option:
    value: Coding
      type: LA32-8
      system:
        v: http://loinc.org
      code:
        v: LA32-8
      display:
        v: No
item:
  link id:
    v: LN/75520-7
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Observation#Observation.valueCodeableConcept
  code: https://loinc.org/rdf/75520-7
    system:
      v: http://loinc.org
    code:
      v: 75520-7
    display:
      v: Biobank specimens are stored and available for research
  text:
    v: Has consent has been obtained for DNA storage (Y/N)
  type:
    v: choice
  answer option:
    value: Coding
      type: LA33-6
      system:
        v: http://loinc.org
      code:
        v: LA33-6
      display:
        v: Yes
  answer option:
    value: Coding
      type: LA32-8
      system:
        v: http://loinc.org
      code:
        v: LA32-8
      display:
        v: No
item:
  link id:
    v: NOS/RODToFollow
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Observation#Observation.valueCodeableConcept
  code:
    system:
      v: https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA
    code:
      v: RODToFollow
  text:
    v: ROD attached or to follow
  type:
    v: choice
  answer option:
    value: Coding
      type: LA33-6
      system:
        v: http://loinc.org
      code:
        v: LA33-6
      display:
        v: Yes
  answer option:
    value: Coding
      type: LA32-8
      system:
        v: http://loinc.org
      code:
        v: LA32-8
      display:
        v: No
  answer option:
    value: Coding
      type: LA4489-6
      system:
        v: http://loinc.org
      code:
        v: LA4489-6
      display:
        v: Unknown

link id:
  v: PatientClinicalInformation
text:
  v: Patient Clinical Information
type:
  v: group
item:
  link id:
    v: LN/51967-8
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/ServiceRequest#ServiceRequest.reasonCode
  code: https://loinc.org/rdf/51967-8
    system:
      v: http://loinc.org
    code:
      v: 51967-8
  code: http://snomed.info/id/782964007
    system:
      v: http://snomed.info/sct
    code:
      v: 782964007
    display:
      v: Genetic disease
  text:
    v: CITT code (Specific disease suspected/reason for testing)
  type:
    v: choice
  repeats:
    v: true
  answer value set:
    v: https://fhir.nwgenomics.nhs.uk/ValueSet/GenomicClinicalIndicationCodes
    link: https://fhir.nwgenomics.nhs.uk/ValueSet/GenomicClinicalIndicationCodes
item:
  link id:
    v: HL7/NTE-1
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/ServiceRequest#ServiceRequest.note
  text:
    v: Relevant clinical information and family history
  type:
    v: string
item:
  link id:
    v: HL7/NTE-2
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/ServiceRequest#ServiceRequest.note
  text:
    v: Reason For Variant Re-Interpretation Request
  type:
    v: string

link id:
  v: Specimen
definition:
  v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Specimen#Specimen
text:
  v: Specimen/Biopsy
type:
  v: group
item:
  link id:
    v: HL7/SPM
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Specimen#Specimen.status
  text:
    v: Sample collection status
  type:
    v: choice
  answer value set:
    v: http://hl7.org/fhir/ValueSet/specimen-status
    link: http://hl7.org/fhir/ValueSet/specimen-status
item:
  link id:
    v: LN/80398-1
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Specimen#Specimen.identifier
  code: https://loinc.org/rdf/80398-1
    system:
      v: http://loinc.org
    code:
      v: 80398-1
    display:
      v: Unique identifier for Current sample
  text:
    v: Specimen ID Number
  type:
    v: string
  item:
    extension:
      url:
        v: http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl
      value: CodeableConcept
    link id:
      v: LN/80398-1-designNote
    text:
      v: ORM v2.4 - OBX-3 = LOINC 80398-1 and OBX-2 = CE. OML v2.5.1 SPM-2
    type:
      v: display
item:
  link id:
    v: Specimen/accessionIdentifier
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Specimen#Specimen.accessionIdentifier
  code: https://loinc.org/rdf/80398-1
    system:
      v: http://loinc.org
    code:
      v: 80398-1
    display:
      v: Unique identifier for Current sample
  text:
    v: Lab DNA Number (If Known)
  type:
    v: string
item:
  link id:
    v: LN/80398-1-ODS
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Specimen#Specimen.accessionIdentifier.assigner.identifier.value
  text:
    v: Pathology Laboratory Hospital/Trust ID (for Path Lab Sample/Stored DNA)
  type:
    v: string
item:
  link id:
    v: LN/33882-2
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Specimen#Specimen.collection.collectedDateTime
  code: https://loinc.org/rdf/33882-2
    system:
      v: http://loinc.org
    code:
      v: 33882-2
    display:
      v: Collection date of Specimen
  code: https://loinc.org/rdf/68963-8
    system:
      v: http://loinc.org
    code:
      v: 68963-8
    display:
      v: Collection date and time of Specimen
  text:
    v: Specimen Collection Date
  type:
    v: dateTime
  item:
    extension:
      url:
        v: http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl
      value: CodeableConcept
    link id:
      v: LN/33882-2-designNote
    text:
      v: ORM v2.4 - OBX-3 = LOINC 33882-2 and OBX-2 = TS . OML v2.5.1 SPM-17
    type:
      v: display
item:
  link id:
    v: LN/66746-9
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Specimen#Specimen.type.coding.code
  code: https://loinc.org/rdf/66746-9
    system:
      v: http://loinc.org
    code:
      v: 66746-9
    display:
      v: Specimen Type
  code: http://snomed.info/id/123038009
    system:
      v: http://snomed.info/sct
    code:
      v: 123038009
    display:
      v: Specimen
  text:
    v: Specimen Type
  type:
    v: choice
  answer value set:
    v: https://fhir.nwgenomics.nhs.uk/ValueSet/specimen-type
    link: https://fhir.nwgenomics.nhs.uk/ValueSet/specimen-type
  item:
    extension:
      url:
        v: http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl
      value: CodeableConcept
    link id:
      v: LN/66746-9-designNote
    text:
      v: ORM v2.4 - OBX-3 = LOINC 66746-9 and OBX-2 = CE. OML v2.5.1 SPM-4
    type:
      v: display
item:
  link id:
    v: SNM/281269004
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Observation#Observation.valueCodeableConcept
  code: http://snomed.info/id/281269004
    system:
      v: http://snomed.info/sct
    code:
      v: 281269004
    display:
      v: High infection risk sample
  text:
    v: High Infection Risk?
  type:
    v: choice
  required:
    v: false
  repeats:
    v: false
  answer option:
    value: Coding
      type: LA33-6
      system:
        v: http://loinc.org
      code:
        v: LA33-6
      display:
        v: Yes
  answer option:
    value: Coding
      type: LA32-8
      system:
        v: http://loinc.org
      code:
        v: LA32-8
      display:
        v: No
item:
  link id:
    v: NOS/InfectionRiskDetails
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Observation#Observation.valueString
  code:
    system:
      v: https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA
    code:
      v: InfectionRiskDetails
  text:
    v: High infection Risk Details
  type:
    v: string
item:
  link id:
    v: LN/74384-9
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Observation#Observation.valueCodeableConcept
  code: http://snomed.info/id/434711009
    system:
      v: http://snomed.info/sct
  code: https://loinc.org/rdf/74384-9

system:
  v: http://hl7.org/fhir/questionnaire-item-control
code:
  v: help

system:
  v: http://hl7.org/fhir/questionnaire-item-control
code:
  v: help

system:
  v: http://hl7.org/fhir/questionnaire-item-control
code:
  v: help

v: 434711009

v: Specimen container

https://loinc.org/rdf/74384-9
system:
  v: http://loinc.org
code:
  v: 74384-9

v: Anticoagulant/preservative?

v: choice

v: false

v: false

value: Coding
  type: LA33-6
  system:
    v: http://loinc.org
  code:
    v: LA33-6
  display:
    v: Yes

value: Coding
  type: LA32-8
  system:
    v: http://loinc.org
  code:
    v: LA32-8
  display:
    v: No

link id:
  v: LN/39111-0
definition:
  v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Specimen#Specimen.collection.bodySite
code: https://loinc.org/rdf/39111-0
  system:
    v: http://loinc.org
  code:
    v: 39111-0
code: https://loinc.org/rdf/31208-2
  system:
    v: http://loinc.org
  code:
    v: 31208-2
  display:
    v: Specimen source identified
text:
  v: Tissue source/organ of origin
type:
  v: choice

link id:
  v: LN/3169-0
definition:
  v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Specimen#Specimen.collection.quantity
code: https://loinc.org/rdf/3169-0
  system:
    v: http://loinc.org
  code:
    v: 3169-0
  display:
    v: Volume of Specimen
code: https://loinc.org/rdf/42185-9
  system:
    v: http://loinc.org
  code:
    v: 42185-9
  display:
    v: Number of specimens obtained
text:
  v: Specimen Volume/number of slides or scrolls
type:
  v: string

link id:
  v: OrderTracking
definition:
  v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Specimen#Specimen.collection
text:
  v: Audit (Specimen Tracking)
type:
  v: group
item:
  link id:
    v: NOS/SampleReceived
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Specimen#Specimen.receivedTime
  text:
    v: Date and time sample received in lab
  type:
    v: date
item:
  link id:
    v: NOS/SampleSent
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Observation#Observation.valueDateTime
  code:
    system:
      v: https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA
    code:
      v: SampleSent
  text:
    v: Date and time sample sent
  type:
    v: date
item:
  link id:
    v: NOS/TransportUsed
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Observation#Observation.valueString
  code:
    system:
      v: https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA
    code:
      v: TransportUsed
  text:
    v: Transport used
  type:
    v: string
item:
  link id:
    v: LN/97209-1
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Specimen#Specimen.identifier[ShipmentTrackingNumber]
  code: https://loinc.org/rdf/97209-1
    system:
      v: http://loinc.org
    code:
      v: 97209-1
  text:
    v: Tracking number
  type:
    v: string
item:
  link id:
    v: NOS/SampleSentTo
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Observation#Observation.valueString
  code:
    system:
      v: https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA
    code:
      v: SampleSentTo
  text:
    v: Sample sent to
  type:
    v: string
item:
  link id:
    v: NOS/SampleSentToName
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Observation#Observation.valueString
  code:
    system:
      v: https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA
    code:
      v: SampleSentToName
  text:
    v: Name of person who sent sample
  type:
    v: string

link id:
  v: AskAtOrderEntry
text:
  v: Ask At Order Entry Questions
type:
  v: group
item:
  link id:
    v: SNM/842009
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Observation#Observation.valueCodeableConcept
  code: http://snomed.info/id/842009
    system:
      v: http://snomed.info/sct
    code:
      v: 842009
    display:
      v: Consanguinity
  text:
    v: Patient is from consanguineous union?
  type:
    v: choice
  answer option:
    value: Coding
      type: LA33-6
      system:
        v: http://loinc.org
      code:
        v: LA33-6
      display:
        v: Yes
  answer option:
    value: Coding
      type: LA32-8
      system:
        v: http://loinc.org
      code:
        v: LA32-8
      display:
        v: No
  answer option:
    value: Coding
      type: LA4489-6
      system:
        v: http://loinc.org
      code:
        v: LA4489-6
      display:
        v: Unknown
item:
  link id:
    v: SNM/74996004-pathology-report
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Observation#Observation.valueCodeableConcept
  code: http://snomed.info/id/74996004
    system:
      v: http://snomed.info/sct
    code:
      v: 74996004
    display:
      v: Confirmation of
  text:
    v: Confirm that a pathology report will be provided alongside the sample.
  type:
    v: choice
  answer option:
    value: Coding
      type: LA33-6
      system:
        v: http://loinc.org
      code:
        v: LA33-6
      display:
        v: Yes
  answer option:
    value: Coding
      type: LA32-8
      system:
        v: http://loinc.org
      code:
        v: LA32-8
      display:
        v: No
  answer option:
    value: Coding
      type: LA4489-6
      system:
        v: http://loinc.org
      code:
        v: LA4489-6
      display:
        v: Unknown
item:
  link id:
    v: SNM/118185001
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Observation#Observation.valueCodeableConcept
  code: http://snomed.info/id/118185001
    system:
      v: http://snomed.info/sct
    code:
      v: 118185001
    display:
      v: Finding related to pregnancy
  text:
    v: Neonatal/Prenatal/Neither?
  type:
    v: choice
  answer option:
    value: Coding
      type: http://snomed.info/id/77386006
      system:
        v: http://snomed.info/sct
      code:
        v: 77386006
      display:
        v: Pregnancy
  answer option:
    value: Coding
      type: http://snomed.info/id/255407002
      system:
        v: http://snomed.info/sct
      code:
        v: 255407002
      display:
        v: Neonatal
  answer option:
    value: Coding
      type: LA32-8
      system:
        v: http://loinc.org
      code:
        v: LA32-8
      display:
        v: No
  item:
    link id:
      v: pregnant
    text:
      v: Pregnant
    type:
      v: group
    enable when:
      question:
        v: SNM/118185001
      operator:
        v: =
      answer: Coding
        type: http://snomed.info/id/77386006
    item:
      link id:
        v: SNM/370386005
      definition:
        v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Observation#Observation.valueCodeableConcept
      code: http://snomed.info/id/370386005
      text:
        v: Does this test relate to a pregnancy with > 1 fetus?
      type:
        v: string
      answer option:
        value: Coding
      answer option:
        value: Coding
      answer option:
        value: Coding
    item:
      link id:
        v: SNM/161714006
      definition:
        v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Observation#Observation.valueDateTime
      code: http://snomed.info/id/161714006
      text:
        v: Patient expected delivery date
      type:
        v: date
    item:
      extension:
        value: Coding
      link id:
        v: SNM/598151000005105
      definition:
        v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Observation#Observation.valueQuantity
      code: http://snomed.info/id/598151000005105
      text:
        v: Patient gestation
      type:
        v: integer
item:
  link id:
    v: SNM/17369002
  definition:
    v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Observation#Observation.valueCodeableConcept
  code: http://snomed.info/id/17369002
    system:
      v: http://snomed.info/sct
    code:
      v: 17369002
    display:
      v: Miscarriage
  text:
    v: Is this test for a pregnancy loss?

v: 77386006

v: 370386005

v: Ultrasound scan - multiple fetus

Coding
type: LA33-6
system:
  v: http://loinc.org
code:
  v: LA33-6
display:
  v: Yes

Coding
type: LA32-8
system:
  v: http://loinc.org
code:
  v: LA32-8
display:
  v: No

Coding
type: LA4489-6
system:
  v: http://loinc.org
code:
  v: LA4489-6
display:
  v: Unknown

v: 161714006

v: Estimated date of delivery

Coding
system:
  v: http://unitsofmeasure.org
code:
  v: wk
display:
  v: Wk

v: 598151000005105

v: Gestational age

v: choice

value: Coding
  type: LA33-6
  system:
    v: http://loinc.org
  code:
    v: LA33-6
  display:
    v: Yes

value: Coding
  type: LA32-8
  system:
    v: http://loinc.org
  code:
    v: LA32-8
  display:
    v: No

value: Coding
  type: LA4489-6
  system:
    v: http://loinc.org
  code:
    v: LA4489-6
  display:
    v: Unknown

link id:
  v: SNM/419099009
definition:
  v: https://fhir.nwgenomics.nhs.uk/StructureDefinition/Observation#Observation.valueCodeableConcept
code: http://snomed.info/id/419099009
  system:
    v: http://snomed.info/sct
  code:
    v: 419099009
  display:
    v: Dead
text:
  v: Is this test for a deceased infant?
type:
  v: choice
answer option:
  value: Coding
    type: LA33-6
    system:
      v: http://loinc.org
    code:
      v: LA33-6
    display:
      v: Yes
answer option:
  value: Coding
    type: LA32-8
    system:
      v: http://loinc.org
    code:
      v: LA32-8
    display:
      v: No
answer option:
  value: Coding
    type: LA4489-6
    system:
      v: http://loinc.org
    code:
      v: LA4489-6
    display:
      v: Unknown

link id:
  v: PriorResults
text:
  v: Prior Results
type:
  v: group