<?xml version="1.0" encoding="UTF-8"?>

<Basic xmlns="http://hl7.org/fhir">
  <id value="GenomicAnalysisAndInterpretation"/>
  <language value="en"/>
  <text>
    <status value="generated"/><div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: ActorDefinition GenomicAnalysisAndInterpretation</b></p><a name="GenomicAnalysisAndInterpretation"> </a><a name="hcGenomicAnalysisAndInterpretation"> </a><table class="grid"><tr><td><b>Actor: GenomicAnalysisAndInterpretation </b></td><td>Genomic Analysis and Interpretation</td><td>Type: system </td></tr><tr><td colspan="3"><div><p>Receives raw genomic data (e.g. sequence data or satellite LIMS results) produced by analysers, together with the work order and its case context (e.g. pedigree, phenotype, clinical indication and panels).
Processes the raw data into variants and prioritises them (bioinformatics pipeline).
Supports interpretation, often with a clinical scientist involved, to select and classify the reportable variants.
Returns the reportable variants and a summary interpretation (e.g. a genomic report) to the Order Filler.
This actor may later be split into a Bioinformatics Processor and an Interpretation / Decision Support actor.</p>
</div></td></tr></table></div>
  </text>
  <extension url="http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.url">
    <valueUri value="https://fhir.nwgenomics.nhs.uk/ActorDefinition/GenomicAnalysisAndInterpretation"/>
  </extension>
  <extension url="http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.version">
    <valueString value="2.2.5"/>
  </extension>
  <extension url="http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.name">
    <valueString value="GenomicAnalysisAndInterpretation"/>
  </extension>
  <extension url="http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.title">
    <valueString value="Genomic Analysis and Interpretation"/>
  </extension>
  <extension url="http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.status">
    <valueCode value="draft"/>
  </extension>
  <extension url="http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.date">
    <valueDateTime value="2026-11-05T06:40:21+00:00"/>
  </extension>
  <extension url="http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.publisher">
    <valueString value="NHS North West Genomics"/>
  </extension>
  <extension url="http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.contact">
    <valueContactDetail>
      <telecom>
        <system value="url"/>
        <value value="https://www.nwgenomics.nhs.uk/contact-us"/>
      </telecom>
    </valueContactDetail>
  </extension>
  <extension url="http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.description">
    <valueMarkdown value="Analyses and interprets raw genomic data. Implemented by bioinformatics pipelines and Decision Support Systems (DSS), e.g. Omics DSS, or the Genomics England bioinformatics pipeline, interpretation services and Interpretation Portal."/>
  </extension>
  <extension url="http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.jurisdiction">
    <valueCodeableConcept>
      <coding>
        <system value="urn:iso:std:iso:3166"/>
        <code value="GB"/>
        <display value="United Kingdom of Great Britain and Northern Ireland"/>
      </coding>
    </valueCodeableConcept>
  </extension>
  <extension url="http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.type">
    <valueCode value="system"/>
  </extension>
  <extension url="http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.documentation">
    <valueMarkdown value="Receives raw genomic data (e.g. sequence data or satellite LIMS results) produced by analysers, together with the work order and its case context (e.g. pedigree, phenotype, clinical indication and panels).&#xA;Processes the raw data into variants and prioritises them (bioinformatics pipeline).&#xA;Supports interpretation, often with a clinical scientist involved, to select and classify the reportable variants.&#xA;Returns the reportable variants and a summary interpretation (e.g. a genomic report) to the Order Filler.&#xA;This actor may later be split into a Bioinformatics Processor and an Interpretation / Decision Support actor."/>
  </extension>
  <code>
    <coding>
      <system value="http://hl7.org/fhir/fhir-types"/>
      <code value="ActorDefinition"/>
    </coding>
  </code>
</Basic>