{ "resourceType" : "Bundle", "id" : "UKCore-MichaelJonesRequest-Example", "meta" : { "profile" : ["https://fhir.nwgenomics.nhs.uk/StructureDefinition/BundleMessage"] }, "language" : "en", "identifier" : { "system" : "https://tools.ietf.org/html/rfc4122", "value" : "30d65c8e-98e8-4806-b6a6-51e94733f0e9" }, "type" : "message", "timestamp" : "2022-07-11T09:00:00Z", "entry" : [{ "fullUrl" : "urn:uuid:a4409d7c-b613-477c-b623-87e60406c2f0", "resource" : { "resourceType" : "MessageHeader", "id" : "a4409d7c-b613-477c-b623-87e60406c2f0", "language" : "en", "text" : { "status" : "generated", "div" : "

Generated Narrative: MessageHeader a4409d7c-b613-477c-b623-87e60406c2f0

event: event: O21 (OML - Laboratory order)

Destinations

-NameEndpointReceiver
*National Genomic Medicine Servicehttps://api.service.nhs.uk/GMSPathology Lab - NORTH WEST GLH LED BY MANCHESTER UNIVERSITY NHS FOUNDATION TRUST (Identifier: ODS Organisation Code/699X0)

sender: NHS Trust - THE CHRISTIE NHS FOUNDATION TRUST (Identifier: ODS Organisation Code/RBV)

Sources

-Endpoint
*https://www.christie.nhs.uk/ehr

focus:

" }, "eventCoding" : { "system" : "http://terminology.hl7.org/CodeSystem/v2-0003", "code" : "O21" }, "destination" : [{ "name" : "National Genomic Medicine Service", "endpoint" : "https://api.service.nhs.uk/GMS", "receiver" : { "identifier" : { "system" : "https://fhir.nhs.uk/Id/ods-organization-code", "value" : "699X0" }, "display" : "Pathology Lab - NORTH WEST GLH LED BY MANCHESTER UNIVERSITY NHS FOUNDATION TRUST" } }], "sender" : { "identifier" : { "system" : "https://fhir.nhs.uk/Id/ods-organization-code", "value" : "RBV" }, "display" : "NHS Trust - THE CHRISTIE NHS FOUNDATION TRUST" }, "source" : { "endpoint" : "https://www.christie.nhs.uk/ehr" }, "focus" : [{ "reference" : "urn:uuid:66c519dd-423f-4238-89c8-91c5be52f330" }, { "reference" : "urn:uuid:840d075e-0480-4134-ae51-27f572731cc8" }, { "reference" : "urn:uuid:87486509-5512-44e9-aa95-6d23ae0c8687" }] } }, { "fullUrl" : "urn:uuid:41e4b604-37f3-4799-a6b3-ab5b104f3c97", "resource" : { "resourceType" : "Patient", "id" : "41e4b604-37f3-4799-a6b3-ab5b104f3c97", "language" : "en", "text" : { "status" : "generated", "div" : "

Generated Narrative: Patient 41e4b604-37f3-4799-a6b3-ab5b104f3c97

Michael Jones(official) Male, DoB: 1989-12-08 ( https://fhir.nhs.uk/Id/nhs-number#NHS Number#9999999999\u00a0(use:\u00a0official,\u00a0))

Active:trueDeceased:false
Multiple Birth:false
Contact Detail
  • ph: 07920754621(Mobile)
  • 48 Astoria Drive Coventry CV4 9ZY
Next-of-Kin:
  • Jane Jones(Official) (Female)
  • 48 Astoria Drive Coventry CV4 9ZY
  • ph: 079468308869(Work)
Links:
  • General Practitioner: Veeda Flavia D'Mello (Identifier: GMC Number/C5173256)
  • Managing Organization: Independent Sector Healthcare Provider - JUBILEE HEALTHCARE (Identifier: ODS Organisation Code/DPX)
Extension UK Core Ethnic CategoryWhite - British
Extension UK Core Residential StatusUK Resident
Extension UK Core Birth SexMale
" }, "extension" : [{ "url" : "https://fhir.hl7.org.uk/StructureDefinition/Extension-UKCore-BirthSex", "valueCodeableConcept" : { "coding" : [{ "system" : "http://terminology.hl7.org/CodeSystem/v3-AdministrativeGender", "code" : "M", "display" : "Male" }] } }, { "url" : "https://fhir.hl7.org.uk/StructureDefinition/Extension-UKCore-EthnicCategory", "valueCodeableConcept" : { "coding" : [{ "system" : "https://fhir.hl7.org.uk/CodeSystem/UKCore-EthnicCategoryEngland", "code" : "A", "display" : "White - British" }] } }, { "url" : "https://fhir.hl7.org.uk/StructureDefinition/Extension-UKCore-ResidentialStatus", "valueCodeableConcept" : { "coding" : [{ "system" : "https://fhir.hl7.org.uk/CodeSystem/UKCore-ResidentialStatus", "code" : "H", "display" : "UK Resident" }] } }], "identifier" : [{ "extension" : [{ "url" : "https://fhir.hl7.org.uk/StructureDefinition/Extension-UKCore-NHSNumberVerificationStatus", "valueCodeableConcept" : { "coding" : [{ "system" : "https://fhir.hl7.org.uk/CodeSystem/UKCore-NHSNumberVerificationStatusEngland", "code" : "01", "display" : "Number present and verified" }] } }], "use" : "official", "system" : "https://fhir.nhs.uk/Id/nhs-number", "value" : "9999999999" }], "active" : true, "name" : [{ "use" : "official", "text" : "Michael Jones", "family" : "Jones", "given" : ["Michael"] }], "telecom" : [{ "system" : "phone", "value" : "07920754621", "use" : "mobile" }], "gender" : "male", "birthDate" : "1989-12-08", "deceasedBoolean" : false, "address" : [{ "type" : "both", "line" : ["48 Astoria Drive"], "city" : "Coventry", "postalCode" : "CV4 9ZY" }], "multipleBirthBoolean" : false, "contact" : [{ "relationship" : [{ "coding" : [{ "system" : "http://terminology.hl7.org/CodeSystem/v2-0131", "code" : "N", "display" : "Next-of-Kin" }] }], "name" : { "use" : "official", "text" : "Jane Jones", "family" : "Jones", "given" : ["Jane"] }, "telecom" : [{ "system" : "phone", "value" : "079468308869", "use" : "work" }], "address" : { "type" : "both", "line" : ["48 Astoria Drive"], "city" : "Coventry", "postalCode" : "CV4 9ZY" }, "gender" : "female" }], "generalPractitioner" : [{ "identifier" : { "system" : "https://fhir.hl7.org.uk/Id/gmc-number", "value" : "C5173256" }, "display" : "Veeda Flavia D'Mello" }], "managingOrganization" : { "identifier" : { "system" : "https://fhir.nhs.uk/Id/ods-organization-code", "value" : "DPX" }, "display" : "Independent Sector Healthcare Provider - JUBILEE HEALTHCARE" } } }, { "fullUrl" : "urn:uuid:66c519dd-423f-4238-89c8-91c5be52f330", "resource" : { "resourceType" : "ServiceRequest", "id" : "66c519dd-423f-4238-89c8-91c5be52f330", "language" : "en", "text" : { "status" : "extensions", "div" : "

Generated Narrative: ServiceRequest 66c519dd-423f-4238-89c8-91c5be52f330

Extension UK Core Coverage: NHS England

identifier: https://www.christie.nhs.uk/ehr/LabOrder123456

instantiatesUri: https://www.england.nhs.uk/wp-content/uploads/2020/11/1869-dpyd-policy-statement.pdf

basedOn: UKCore-CarePlan-PancreaticCancerPlan-Example

status: Active

intent: Order

category: Genetic test

priority: Routine

code: Paediatric IDH-wildtype glioblastoma tumour and germline WGS (whole genome sequencing)

subject: Michael Jones (no stated gender), DoB: 1989-12-08 ( https://fhir.nhs.uk/Id/nhs-number#NHS Number#9999999999)

encounter: UKCore-Encounter-OncologyConsultation-Example

authoredOn: 2022-07-11 09:00:00+0000

requester: PractitionerRole: identifier = https://fhir.nhs.uk/Id/sds-role-profile-id#100102238986; telecom = lucy.hale@nhs.net,ph: 02476151602

performer: Pathology Lab - NORTH WEST GLH LED BY MANCHESTER UNIVERSITY NHS FOUNDATION TRUST (Identifier: ODS Organisation Code/699X0)

" }, "extension" : [{ "url" : "https://fhir.hl7.org.uk/StructureDefinition/Extension-UKCore-Coverage", "valueCodeableConcept" : { "coding" : [{ "system" : "https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory", "code" : "nhs-england", "display" : "NHS England" }] } }], "identifier" : [{ "system" : "https://www.christie.nhs.uk/ehr", "value" : "LabOrder123456", "assigner" : { "identifier" : { "system" : "https://fhir.nhs.uk/Id/ods-organization-code", "value" : "RBV" }, "display" : "NHS Trust - THE CHRISTIE NHS FOUNDATION TRUST" } }], "instantiatesUri" : ["https://www.england.nhs.uk/wp-content/uploads/2020/11/1869-dpyd-policy-statement.pdf"], "basedOn" : [{ "display" : "UKCore-CarePlan-PancreaticCancerPlan-Example" }], "status" : "active", "intent" : "order", "category" : [{ "coding" : [{ "system" : "http://snomed.info/sct", "code" : "405824009", "display" : "Genetic test" }] }], "priority" : "routine", "code" : { "coding" : [{ "system" : "http://snomed.info/sct", "code" : "63491000000109", "display" : "Paediatric IDH-wildtype glioblastoma tumour and germline WGS (whole genome sequencing)" }] }, "subject" : { "reference" : "urn:uuid:41e4b604-37f3-4799-a6b3-ab5b104f3c97", "identifier" : { "system" : "https://fhir.nhs.uk/Id/nhs-number", "value" : "9999999999" } }, "encounter" : { "display" : "UKCore-Encounter-OncologyConsultation-Example" }, "authoredOn" : "2022-07-11T09:00:00Z", "requester" : { "reference" : "urn:uuid:3462583a-536c-4bad-99d3-44dc553921fd" }, "performer" : [{ "identifier" : { "system" : "https://fhir.nhs.uk/Id/ods-organization-code", "value" : "699X0" }, "display" : "Pathology Lab - NORTH WEST GLH LED BY MANCHESTER UNIVERSITY NHS FOUNDATION TRUST" }] } }, { "fullUrl" : "urn:uuid:3462583a-536c-4bad-99d3-44dc553921fd", "resource" : { "resourceType" : "PractitionerRole", "id" : "3462583a-536c-4bad-99d3-44dc553921fd", "language" : "en", "text" : { "status" : "generated", "div" : "

Generated Narrative: PractitionerRole 3462583a-536c-4bad-99d3-44dc553921fd

identifier: https://fhir.nhs.uk/Id/sds-role-profile-id/100102238986

practitioner: Lucy Hale (Identifier: GMC Number/C9999999\u00a0(use:\u00a0official,\u00a0))

organization: NHS Trust - THE CHRISTIE NHS FOUNDATION TRUST (Identifier: ODS Organisation Code/RBV)

telecom: lucy.hale@nhs.net, ph: 02476151602(Work)

" }, "identifier" : [{ "system" : "https://fhir.nhs.uk/Id/sds-role-profile-id", "value" : "100102238986" }], "practitioner" : { "identifier" : { "use" : "official", "system" : "https://fhir.hl7.org.uk/Id/gmc-number", "value" : "C9999999" }, "display" : "Lucy Hale" }, "organization" : { "identifier" : { "system" : "https://fhir.nhs.uk/Id/ods-organization-code", "value" : "RBV" }, "display" : "NHS Trust - THE CHRISTIE NHS FOUNDATION TRUST" }, "telecom" : [{ "system" : "email", "value" : "lucy.hale@nhs.net", "use" : "work" }, { "system" : "phone", "value" : "02476151602", "use" : "work" }] } }, { "fullUrl" : "urn:uuid:840d075e-0480-4134-ae51-27f572731cc8", "resource" : { "resourceType" : "Specimen", "id" : "840d075e-0480-4134-ae51-27f572731cc8", "language" : "en", "text" : { "status" : "generated", "div" : "

Generated Narrative: Specimen 840d075e-0480-4134-ae51-27f572731cc8

identifier: https://www.christie.nhs.uk/path/Spec123456

accessionIdentifier: https://www.christie.nhs.uk/path/Spec123456

status: Available

type: Blood specimen

subject: Michael Jones (no stated gender), DoB: 1989-12-08 ( https://fhir.nhs.uk/Id/nhs-number#NHS Number#9999999999)

receivedTime: 2022-07-13 09:00:00+0000

request: ServiceRequest Paediatric IDH-wildtype glioblastoma tumour and germline WGS (whole genome sequencing)

Collections

-CollectorCollected[x]QuantityMethodBodySite
*Mary Lane (Identifier: https://fhir.nhs.uk/Id/sds-user-id/999999\u00a0(use:\u00a0official,\u00a0))2022-07-11 09:00:00+00002.5 mL (Details: UCUM codemL = 'mL')Puncture - actionForearm structure

Containers

-IdentifierTypeSpecimenQuantity
*Accession ID/ASCN123456\u00a0(use:\u00a0official,\u00a0)Blood collection/transfer device2.5 mL (Details: UCUM codemL = 'mL')

condition: Sample not received

" }, "identifier" : [{ "system" : "https://www.christie.nhs.uk/path", "value" : "Spec123456" }], "accessionIdentifier" : { "system" : "https://www.christie.nhs.uk/path", "value" : "Spec123456" }, "status" : "available", "type" : { "coding" : [{ "system" : "http://snomed.info/sct", "code" : "119297000", "display" : "Blood specimen" }] }, "subject" : { "reference" : "urn:uuid:41e4b604-37f3-4799-a6b3-ab5b104f3c97", "identifier" : { "system" : "https://fhir.nhs.uk/Id/nhs-number", "value" : "9999999999" } }, "receivedTime" : "2022-07-13T09:00:00Z", "request" : [{ "reference" : "urn:uuid:66c519dd-423f-4238-89c8-91c5be52f330" }], "collection" : { "collector" : { "identifier" : { "use" : "official", "system" : "https://fhir.nhs.uk/Id/sds-user-id", "value" : "999999" }, "display" : "Mary Lane" }, "collectedDateTime" : "2022-07-11T09:00:00Z", "quantity" : { "value" : 2.5, "system" : "http://unitsofmeasure.org", "code" : "mL" }, "method" : { "coding" : [{ "system" : "http://snomed.info/sct", "code" : "129300006", "display" : "Puncture - action" }] }, "bodySite" : { "coding" : [{ "system" : "http://snomed.info/sct", "code" : "14975008", "display" : "Forearm structure" }] } }, "container" : [{ "identifier" : [{ "use" : "official", "type" : { "coding" : [{ "system" : "http://terminology.hl7.org/CodeSystem/v2-0203", "code" : "ACSN", "display" : "Accession ID" }] }, "system" : "https://www.christie.nhs.uk/path", "value" : "ASCN123456", "assigner" : { "identifier" : { "system" : "https://fhir.nhs.uk/Id/ods-organization-code", "value" : "RBV" }, "display" : "NHS Trust - THE CHRISTIE NHS FOUNDATION TRUST" } }], "type" : { "coding" : [{ "system" : "http://snomed.info/sct", "code" : "706067003", "display" : "Blood collection/transfer device" }] }, "specimenQuantity" : { "value" : 2.5, "system" : "http://unitsofmeasure.org", "code" : "mL" } }], "condition" : [{ "coding" : [{ "system" : "http://terminology.hl7.org/CodeSystem/v2-0493", "code" : "SNR", "display" : "Sample not received" }] }] } }, { "fullUrl" : "urn:uuid:87486509-5512-44e9-aa95-6d23ae0c8687", "resource" : { "resourceType" : "Consent", "id" : "87486509-5512-44e9-aa95-6d23ae0c8687", "language" : "en", "text" : { "status" : "generated", "div" : "

Generated Narrative: Consent 87486509-5512-44e9-aa95-6d23ae0c8687

Participants

RoleDetails
PatientMichael Jones (no stated gender), DoB: 1989-12-08 ( https://fhir.nhs.uk/Id/nhs-number#NHS Number#9999999999)
PartyMichael Jones (no stated gender), DoB: 1989-12-08 ( https://fhir.nhs.uk/Id/nhs-number#NHS Number#9999999999)
ManagerNHS Trust - THE CHRISTIE NHS FOUNDATION TRUST (Identifier: ODS Organisation Code/RBV)

This consent is made under the policy https://s3.eu-west-2.amazonaws.com/ge-production-s3/forms/Participant-consent-form-for-patients-with-cancer-or-suspected-cancer-C1.pdf .

\r\n\r\n
RuleTime PeriodWhoWhat\"doco\"
\".\"\".\" permit
\".\"\".\"\".\" permit
  • Period: 2022-07-11 09:00:00+0000 --> 2025-07-11 08:59:59+0000
  • data processor: Pathology Lab - NORTH WEST GLH LED BY MANCHESTER UNIVERSITY NHS FOUNDATION TRUST (Identifier: ODS Organisation Code/699X0)

\"doco\" Documentation for this format
" }, "identifier" : [{ "system" : "https://www.christie.nhs.uk/ehr", "value" : "Consent123456", "assigner" : { "identifier" : { "system" : "https://fhir.nhs.uk/Id/ods-organization-code", "value" : "RBV" }, "display" : "NHS Trust - THE CHRISTIE NHS FOUNDATION TRUST" } }], "status" : "active", "scope" : { "coding" : [{ "system" : "http://terminology.hl7.org/CodeSystem/consentscope", "code" : "research", "display" : "Research" }] }, "category" : [{ "coding" : [{ "system" : "http://terminology.hl7.org/CodeSystem/consentcategorycodes", "code" : "research", "display" : "Research Information Access" }] }], "patient" : { "reference" : "urn:uuid:41e4b604-37f3-4799-a6b3-ab5b104f3c97" }, "dateTime" : "2022-07-11T09:00:00Z", "performer" : [{ "reference" : "urn:uuid:41e4b604-37f3-4799-a6b3-ab5b104f3c97" }], "organization" : [{ "identifier" : { "system" : "https://fhir.nhs.uk/Id/ods-organization-code", "value" : "RBV" }, "display" : "NHS Trust - THE CHRISTIE NHS FOUNDATION TRUST" }], "sourceAttachment" : { "contentType" : "application/pdf", "language" : "en-GB", "url" : "https://files.genomicsengland.co.uk/forms/Participant-consent-form-for-patients-with-cancer-or-suspected-cancer-C1.pdf", "size" : 539588, "title" : "Participant-consent-form-for-patients-with-cancer-or-suspected-cancer-C1_MJ", "creation" : "2022-07-11T09:00:00Z" }, "policy" : [{ "uri" : "https://s3.eu-west-2.amazonaws.com/ge-production-s3/forms/Participant-consent-form-for-patients-with-cancer-or-suspected-cancer-C1.pdf" }], "verification" : [{ "verified" : true, "verifiedWith" : { "reference" : "urn:uuid:41e4b604-37f3-4799-a6b3-ab5b104f3c97" }, "verificationDate" : "2022-07-11T09:00:00Z" }], "provision" : { "type" : "permit", "period" : { "start" : "2022-07-11T09:00:00Z", "end" : "2025-07-11T08:59:59Z" }, "actor" : [{ "role" : { "coding" : [{ "system" : "http://terminology.hl7.org/CodeSystem/extra-security-role-type", "code" : "dataprocessor", "display" : "data processor" }] }, "reference" : { "identifier" : { "system" : "https://fhir.nhs.uk/Id/ods-organization-code", "value" : "699X0" }, "display" : "Pathology Lab - NORTH WEST GLH LED BY MANCHESTER UNIVERSITY NHS FOUNDATION TRUST" } }], "action" : [{ "coding" : [{ "system" : "http://terminology.hl7.org/CodeSystem/consentaction", "code" : "access", "display" : "Access" }] }, { "coding" : [{ "system" : "http://terminology.hl7.org/CodeSystem/consentaction", "code" : "use", "display" : "Use" }] }], "class" : [{ "system" : "http://hl7.org/fhir/resource-types", "code" : "DiagnosticReport", "display" : "DiagnosticReport" }, { "system" : "http://hl7.org/fhir/resource-types", "code" : "ClinicalImpression", "display" : "ClinicalImpression" }, { "system" : "http://hl7.org/fhir/resource-types", "code" : "Condition", "display" : "Condition" }, { "system" : "http://hl7.org/fhir/resource-types", "code" : "MolecularSequence", "display" : "MolecularSequence" }, { "system" : "http://hl7.org/fhir/resource-types", "code" : "Observation", "display" : "Observation" }], "code" : [{ "coding" : [{ "system" : "https://www.england.nhs.uk/publication/national-genomic-test-directories", "code" : "M219.3", "display" : "DPYD hotspot" }] }] } } }] }