Generated Narrative: Questionnaire BCRABLResultPanel

Profile: Questionnaire

LinkIDTextCardinalityTypeDescription & Constraintsdoco
.. Result panel for BCR-ABL1 monitoring (chronic myeloid leukaemia), capturing a Cepheid-class ASTM-communicating analyser's result as a [Laboratory Analyte Result](StructureDefinition-LaboratoryAnalyteResult.html) `Observation` - see [BCR-ABL Monitoring](BCRABLMonitoring.html). `item.definition` and `item.code` are inferred directly from this IG's own example `Observation`s - [Observation-BCRABL-Valid](Observation-BCRABL-Valid.html), [Observation-BCRABL-Invalid](Observation-BCRABL-Invalid.html) and `Observation-LAR-BCRABL` (`input/fsh/Examples/BCRABL/`) - not just the [data mapping table](LaboratoryAnalyteResult.html#data-mapping): the local `Cepheid` CodeSystem component codes below (`BCR-ABL&`, `ABL&Ct`, etc.) are the exact codes those examples use, and the two examples together show both a normal result and the `dataAbsentReason` shape used when a value is invalid/out of range.Questionnairehttps://fhir.nwgenomics.nhs.uk/Questionnaire/BCRABLResultPanel#2.2.0
... ResultBCR-ABL Result0..1groupDefinition: Observation
.... LN/89061-6NHS Number0..1stringDefinition: Observation.subject.identifier
.... Cepheid/AssayCodeAnalyte Code1..1stringDefinition: Observation.code
..... Cepheid/AssayCode-designNoteObservation.code carries two codings: the Cepheid analyte code (e.g. BCRABL) and, per Observation-BCRABL-Valid, the specific Cepheid cartridge/assay code (e.g. Xpert-BCR-ABL-Ultra-G2).0..1display
.... Cepheid/TestStartTest Start DateTime0..1dateTimeDefinition: Observation.effectivePeriod.start
.... Cepheid/TestEndTest End DateTime0..1dateTimeDefinition: Observation.effectivePeriod.end
.... Cepheid/PerformerPerformer0..1stringDefinition: Observation.performer
..... Cepheid/Performer-designNoteBoth examples carry two performers: the performing laboratory (Organization, ODS code) and the analyst (practitioner display text only).0..1display
.... OBR-25Result Status0..1choiceDefinition: Observation.status
..... OBR-25-designNoteBoth examples use status = final (F).0..1display
.... Cepheid/ReferenceRangeReference Range0..1stringDefinition: Observation.referenceRange.text
..... Cepheid/ReferenceRange-designNoteBoth examples use text-only "0.0030-55.00", not a coded low/high Quantity.0..1display
.... Cepheid/ValueAnalyte Result (%IS)0..1decimalDefinition: Observation.valueQuantity.value
..... Cepheid/Value-designNoteObservation-BCRABL-Valid populates this (0.011); Observation-BCRABL-Invalid omits it entirely and populates Value Absent below instead - the two are mutually exclusive in both examples.0..1display
.... Cepheid/ValueAbsentValue Absent0..1stringDefinition: Observation.dataAbsentReason.text
..... Cepheid/ValueAbsent-designNoteObservation-BCRABL-Invalid uses this for an out-of-range result: dataAbsentReason.text = "POSITIVE [Above upper LoQ]".0..1display
.... Cepheid/DeviceIdentifierDevice Identifier0..1stringDefinition: Observation.device.identifier
..... Cepheid/DeviceIdentifier-designNoteBoth examples carry the full Cepheid instrument/run identifier string (e.g. "20901225~08699~114262192~604297~700039~WinDev2006Eval") as a single identifier value, not decomposed into its component parts.0..1display
.... ResultDetailResult Detail0..1groupDefinition: Observation.component
..... Cepheid/MRMR0..1decimalDefinition: Observation.component.valueQuantity
...... Cepheid/MR-designNotePresent (valueQuantity) in Observation-BCRABL-Valid; present but with no value[x] at all in Observation-BCRABL-Invalid - the component itself is still listed.0..1display
..... Cepheid/BCR-ABLBCR-ABL Analyte Result0..1stringDefinition: Observation.component.valueString
..... Cepheid/BCR-ABL-CtBCR-ABL Ct0..1decimalDefinition: Observation.component.valueQuantity
..... Cepheid/BCR-ABL-EndPtBCR-ABL EndPt0..1decimalDefinition: Observation.component.valueQuantity
..... Cepheid/BCR-ABL-DeltaCtBCR-ABL Target Delta Ct0..1decimalDefinition: Observation.component.valueQuantity
..... Cepheid/ABLABL Probe Check Result0..1stringDefinition: Observation.component.valueString
..... Cepheid/ABL-CtABL Ct0..1decimalDefinition: Observation.component.valueQuantity
..... Cepheid/ABL-EndPtABL EndPt0..1decimalDefinition: Observation.component.valueQuantity
...... Cepheid/ABL-EndPt-designNoteThe BCRABL Result Detail table (see LaboratoryAnalyteResult.html and BCRABLMonitoring.html) also lists ABL_Probe_Check_Result, BCR-ABL_Probe_Check_Result as separate rows and a few "??"-flagged local codes - neither example Observation actually populates a distinct Probe_Check_Result component beyond ABL&/BCR-ABL&, so this Questionnaire only models the 8 components genuinely present in the example data.0..1display

doco Documentation for this format
 <status value="active"/> <date value="2026-09-20T05:53:36+00:00"/> <publisher value="NHS North West Genomics"/> <contact> <telecom> <system value="url"/> <value value="https://www.nwgenomics.nhs.uk/contact-us"/> </telecom> </contact> <description value="Result panel for BCR-ABL1 monitoring (chronic myeloid leukaemia), capturing a Cepheid-class ASTM-communicating analyser's result as a [Laboratory Analyte Result](StructureDefinition-LaboratoryAnalyteResult.html) `Observation` - see [BCR-ABL Monitoring](BCRABLMonitoring.html). `item.definition` and `item.code` are inferred directly from this IG's own example `Observation`s - [Observation-BCRABL-Valid](Observation-BCRABL-Valid.html), [Observation-BCRABL-Invalid](Observation-BCRABL-Invalid.html) and `Observation-LAR-BCRABL` (`input/fsh/Examples/BCRABL/`) - not just the [data mapping table](LaboratoryAnalyteResult.html#data-mapping): the local `Cepheid` CodeSystem component codes below (`BCR-ABL&`, `ABL&Ct`, etc.) are the exact codes those examples use, and the two examples together show both a normal result and the `dataAbsentReason` shape used when a value is invalid/out of range."/> <jurisdiction> <coding> <system value="urn:iso:std:iso:3166"/> <code value="GB"/> <display value="United Kingdom of Great Britain and Northern Ireland"/> </coding> </jurisdiction> <code> <system value="http://loinc.org"/> <code value="69380-4"/> <display value="t(9;22)(q34.1;q11)(ABL1,BCR) b2a2+b3a2 fusion transcript/control transcript (International Scale) [# Ratio] in Blood or Tissue by Molecular genetics method"/> </code> <item> <linkId value="Result"/> <definition value="http://hl7.org/fhir/StructureDefinition/Observation#Observation"/> <text value="BCR-ABL Result"/> <type value="group"/> <item> <linkId value="LN/89061-6"/> <definition value="http://hl7.org/fhir/StructureDefinition/Observation#Observation.subject.identifier"/> <code> <system value="http://loinc.org"/> <code value="89061-6"/> </code> <text value="NHS Number"/> <type value="string"/> </item> <item> <linkId value="Cepheid/AssayCode"/> <definition value="http://hl7.org/fhir/StructureDefinition/Observation#Observation.code"/> <code> <system value="https://fhir.nwgenomics.nhs.uk/CodeSystem/Cepheid"/> <code value="BCRABL"/> </code> <text value="Analyte Code"/> <type value="string"/> <required value="true"/> <item> <extension url="http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl"> <valueCodeableConcept> <coding> <system value="http://hl7.org/fhir/questionnaire-item-control"/> <code value="help"/> </coding> </valueCodeableConcept> </extension> <linkId value="Cepheid/AssayCode-designNote"/> <text value="Observation.code carries two codings: the Cepheid analyte code (e.g. BCRABL) and, per Observation-BCRABL-Valid, the specific Cepheid cartridge/assay code (e.g. Xpert-BCR-ABL-Ultra-G2)."/> <type value="display"/> </item> </item> <item> <linkId value="Cepheid/TestStart"/> <definition value="http://hl7.org/fhir/StructureDefinition/Observation#Observation.effectivePeriod.start"/> <text value="Test Start DateTime"/> <type value="dateTime"/> </item> <item> <linkId value="Cepheid/TestEnd"/> <definition value="http://hl7.org/fhir/StructureDefinition/Observation#Observation.effectivePeriod.end"/> <text value="Test End DateTime"/> <type value="dateTime"/> </item> <item> <linkId value="Cepheid/Performer"/> <definition value="http://hl7.org/fhir/StructureDefinition/Observation#Observation.performer"/> <text value="Performer"/> <type value="string"/> <item> <extension url="http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl"> <valueCodeableConcept> <coding> <system value="http://hl7.org/fhir/questionnaire-item-control"/> <code value="help"/> </coding> </valueCodeableConcept> </extension> <linkId value="Cepheid/Performer-designNote"/> <text value="Both examples carry two performers: the performing laboratory (Organization, ODS code) and the analyst (practitioner display text only)."/> <type value="display"/> </item> </item> <item> <linkId value="OBR-25"/> <definition value="http://hl7.org/fhir/StructureDefinition/Observation#Observation.status"/> <code> <system value="http://loinc.org"/> <code value="89264-8"/> <display value="Overall Interpretation of Study"/> </code> <text value="Result Status"/> <type value="choice"/> <item> <extension url="http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl"> <valueCodeableConcept> <coding> <system value="http://hl7.org/fhir/questionnaire-item-control"/> <code value="help"/> </coding> </valueCodeableConcept> </extension> <linkId value="OBR-25-designNote"/> <text value="Both examples use status = final (F)."/> <type value="display"/> </item> </item> <item> <linkId value="Cepheid/ReferenceRange"/> <definition value="http://hl7.org/fhir/StructureDefinition/Observation#Observation.referenceRange.text"/> <text value="Reference Range"/> <type value="string"/> <item> <extension url="http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl"> <valueCodeableConcept> <coding> <system value="http://hl7.org/fhir/questionnaire-item-control"/> <code value="help"/> </coding> </valueCodeableConcept> </extension> <linkId value="Cepheid/ReferenceRange-designNote"/> <text value="Both examples use text-only "0.0030-55.00", not a coded low/high Quantity."/> <type value="display"/> </item> </item> <item> <linkId value="Cepheid/Value"/> <definition value="http://hl7.org/fhir/StructureDefinition/Observation#Observation.valueQuantity.value"/> <text value="Analyte Result (%IS)"/> <type value="decimal"/> <item> <extension url="http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl"> <valueCodeableConcept> <coding> <system value="http://hl7.org/fhir/questionnaire-item-control"/> <code value="help"/> </coding> </valueCodeableConcept> </extension> <linkId value="Cepheid/Value-designNote"/> <text value="Observation-BCRABL-Valid populates this (0.011); Observation-BCRABL-Invalid omits it entirely and populates Value Absent below instead - the two are mutually exclusive in both examples."/> <type value="display"/> </item> </item> <item> <linkId value="Cepheid/ValueAbsent"/> <definition value="http://hl7.org/fhir/StructureDefinition/Observation#Observation.dataAbsentReason.text"/> <text value="Value Absent"/> <type value="string"/> <item> <extension url="http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl"> <valueCodeableConcept> <coding> <system value="http://hl7.org/fhir/questionnaire-item-control"/> <code value="help"/> </coding> </valueCodeableConcept> </extension> <linkId value="Cepheid/ValueAbsent-designNote"/> <text value="Observation-BCRABL-Invalid uses this for an out-of-range result: dataAbsentReason.text = "POSITIVE [Above upper LoQ]"."/> <type value="display"/> </item> </item> <item> <linkId value="Cepheid/DeviceIdentifier"/> <definition value="http://hl7.org/fhir/StructureDefinition/Observation#Observation.device.identifier"/> <text value="Device Identifier"/> <type value="string"/> <item> <extension url="http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl"> <valueCodeableConcept> <coding> <system value="http://hl7.org/fhir/questionnaire-item-control"/> <code value="help"/> </coding> </valueCodeableConcept> </extension> <linkId value="Cepheid/DeviceIdentifier-designNote"/> <text value="Both examples carry the full Cepheid instrument/run identifier string (e.g. "20901225~08699~114262192~604297~700039~WinDev2006Eval") as a single identifier value, not decomposed into its component parts."/> <type value="display"/> </item> </item> <item> <linkId value="ResultDetail"/> <definition value="http://hl7.org/fhir/StructureDefinition/Observation#Observation.component"/> <text value="Result Detail"/> <type value="group"/> <item> <linkId value="Cepheid/MR"/> <definition value="http://hl7.org/fhir/StructureDefinition/Observation#Observation.component.valueQuantity"/> <code> <system value="https://fhir.nwgenomics.nhs.uk/CodeSystem/Cepheid"/> <code value="&MR"/> </code> <text value="MR"/> <type value="decimal"/> <item> <extension url="http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl"> <valueCodeableConcept> <coding> <system value="http://hl7.org/fhir/questionnaire-item-control"/> <code value="help"/> </coding> </valueCodeableConcept> </extension> <linkId value="Cepheid/MR-designNote"/> <text value="Present (valueQuantity) in Observation-BCRABL-Valid; present but with no value[x] at all in Observation-BCRABL-Invalid - the component itself is still listed."/> <type value="display"/> </item> </item> <item> <linkId value="Cepheid/BCR-ABL"/> <definition value="http://hl7.org/fhir/StructureDefinition/Observation#Observation.component.valueString"/> <code> <system value="https://fhir.nwgenomics.nhs.uk/CodeSystem/Cepheid"/> <code value="BCR-ABL&"/> </code> <text value="BCR-ABL Analyte Result"/> <type value="string"/> </item> <item> <linkId value="Cepheid/BCR-ABL-Ct"/> <definition value="http://hl7.org/fhir/StructureDefinition/Observation#Observation.component.valueQuantity"/> <code> <system value="https://fhir.nwgenomics.nhs.uk/CodeSystem/Cepheid"/> <code value="BCR-ABL&Ct"/> </code> <text value="BCR-ABL Ct"/> <type value="decimal"/> </item> <item> <linkId value="Cepheid/BCR-ABL-EndPt"/> <definition value="http://hl7.org/fhir/StructureDefinition/Observation#Observation.component.valueQuantity"/> <code> <system value="https://fhir.nwgenomics.nhs.uk/CodeSystem/Cepheid"/> <code value="BCR-ABL&EndPt"/> </code> <text value="BCR-ABL EndPt"/> <type value="decimal"/> </item> <item> <linkId value="Cepheid/BCR-ABL-DeltaCt"/> <definition value="http://hl7.org/fhir/StructureDefinition/Observation#Observation.component.valueQuantity"/> <code> <system value="https://fhir.nwgenomics.nhs.uk/CodeSystem/Cepheid"/> <code value="BCR-ABL&Delta Ct"/> </code> <text value="BCR-ABL Target Delta Ct"/> <type value="decimal"/> </item> <item> <linkId value="Cepheid/ABL"/> <definition value="http://hl7.org/fhir/StructureDefinition/Observation#Observation.component.valueString"/> <code> <system value="https://fhir.nwgenomics.nhs.uk/CodeSystem/Cepheid"/> <code value="ABL&"/> </code> <text value="ABL Probe Check Result"/> <type value="string"/> </item> <item> <linkId value="Cepheid/ABL-Ct"/> <definition value="http://hl7.org/fhir/StructureDefinition/Observation#Observation.component.valueQuantity"/> <code> <system value="https://fhir.nwgenomics.nhs.uk/CodeSystem/Cepheid"/> <code value="ABL&Ct"/> </code> <text value="ABL Ct"/> <type value="decimal"/> </item> <item> <linkId value="Cepheid/ABL-EndPt"/> <definition value="http://hl7.org/fhir/StructureDefinition/Observation#Observation.component.valueQuantity"/> <code> <system value="https://fhir.nwgenomics.nhs.uk/CodeSystem/Cepheid"/> <code value="ABL&EndPt"/> </code> <text value="ABL EndPt"/> <type value="decimal"/> <item> <extension url="http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl"> <valueCodeableConcept> <coding> <system value="http://hl7.org/fhir/questionnaire-item-control"/> <code value="help"/> </coding> </valueCodeableConcept> </extension> <linkId value="Cepheid/ABL-EndPt-designNote"/> <text value="The BCRABL Result Detail table (see LaboratoryAnalyteResult.html and BCRABLMonitoring.html) also lists ABL_Probe_Check_Result, BCR-ABL_Probe_Check_Result as separate rows and a few "??"-flagged local codes - neither example Observation actually populates a distinct Probe_Check_Result component beyond ABL&/BCR-ABL&, so this Questionnaire only models the 8 components genuinely present in the example data."/> <type value="display"/> </item> </item> </item> </item> </Questionnaire>