North West Genomic Medicine Service Alliance
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Example OperationOutcome: Output from a FHIR Validation

OperationOutcome Source File: c:\validate\5edc5fdd-6c00-4875-a7da-e1cdf674a92e-in.json

issue

OperationOutcome Line of Issue: 437

OperationOutcome Column of Issue: 6

OperationOutcome Source of Issue: InstanceValidator

OperationOutcome Message ID: Validation_VAL_Profile_Minimum

severity: Error

code: Structural Issue

details: ServiceRequest.identifier: minimum required = 1, but only found 0 (from https://nw-gmsa.github.io/StructureDefinition/ServiceRequest|0.0.6)

expression: Bundle.entry[8].resource

issue

OperationOutcome Line of Issue: 437

OperationOutcome Column of Issue: 6

OperationOutcome Source of Issue: InstanceValidator

OperationOutcome Message ID: Extension_EXTP_Context_Wrong

severity: Error

code: Structural Issue

details: The extension https://fhir.hl7.org.uk/StructureDefinition/Extension-UKCore-AdditionalContact is not allowed to be used at this point (allowed = e:ServiceRequest; this element is [Bundle.entry.resource])

expression: Bundle.entry[8].resource

issue

OperationOutcome Line of Issue: 437

OperationOutcome Column of Issue: 6

OperationOutcome Source of Issue: InstanceValidator

OperationOutcome Message ID: Extension_EXTP_Context_Wrong

severity: Error

code: Structural Issue

details: The extension https://fhir.hl7.org.uk/StructureDefinition/Extension-UKCore-Coverage is not allowed to be used at this point (allowed = e:ServiceRequest; this element is [Bundle.entry.resource])

expression: Bundle.entry[8].resource

issue

OperationOutcome Line of Issue: 492

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: InstanceValidator

OperationOutcome Message ID: Reference_REF_CantMatchChoice

severity: Error

code: Structural Issue

details: Unable to find a profile match for PractitionerRole/PractitionerRole-HazelSmithKingstonPathology-Example among choices: https://nw-gmsa.github.io/StructureDefinition/PractitionerRole

expression: Bundle.entry[8].resource.requester

issue

OperationOutcome Line of Issue: 575

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: TerminologyEngine

OperationOutcome Message ID: MSG_RETIRED

severity: Information

code: Business Rule Violation

details: Reference to retired CodeSystem https://fhir.hl7.org.uk/CodeSystem/UKCore-BiopsyState|1.0.0

expression: Bundle.entry[9].resource/*Specimen/Specimen-CancerSolidTumor-Example*/.condition[0]

issue

OperationOutcome Line of Issue: 350

OperationOutcome Column of Issue: 4

OperationOutcome Source of Issue: InstanceValidator

OperationOutcome Message ID: BUNDLE_BUNDLE_ENTRY_REVERSE_MSG

severity: Information

code: Informational Note

details: Entry 'http://example.org/fhir/Observation/Observation-Necrosis-Example' isn't reachable by traversing forwards from the MessageHeader. Check that this is meant to be included (needed to process the message)

expression: Bundle.entry[12]

issue

OperationOutcome Line of Issue: 509

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: InstanceValidator

OperationOutcome Message ID: Details_for__matching_against_Profile_

severity: Information

code: Informational Note

details: This element does not match any known slice defined in the profile https://nw-gmsa.github.io/StructureDefinition/ServiceRequest|0.0.6 (this may not be a problem, but you should check that it's not intended to match a slice)

expression: Bundle.entry[8].resource.supportingInfo[0]

issue

OperationOutcome Line of Issue: 512

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: InstanceValidator

OperationOutcome Message ID: Details_for__matching_against_Profile_

severity: Information

code: Informational Note

details: This element does not match any known slice defined in the profile https://nw-gmsa.github.io/StructureDefinition/ServiceRequest|0.0.6 (this may not be a problem, but you should check that it's not intended to match a slice)

expression: Bundle.entry[8].resource.supportingInfo[1]

issue

OperationOutcome Line of Issue: 515

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: InstanceValidator

OperationOutcome Message ID: Details_for__matching_against_Profile_

severity: Information

code: Informational Note

details: This element does not match any known slice defined in the profile https://nw-gmsa.github.io/StructureDefinition/ServiceRequest|0.0.6 (this may not be a problem, but you should check that it's not intended to match a slice)

expression: Bundle.entry[8].resource.supportingInfo[2]

issue

OperationOutcome Line of Issue: 76

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: TerminologyEngine

OperationOutcome Message ID: Terminology_TX_NoValid_3_CC

severity: Information

code: Invalid Code

details: None of the codings provided are in the value set 'Practice Setting Code Value Set' (http://hl7.org/fhir/ValueSet/c80-practice-codes|4.0.1), and a coding is recommended to come from this value set (codes = https://fhir.hl7.org.uk/CodeSystem/UKCore-PracticeSettingCode#820)

expression: Bundle.entry[1].resource/*PractitionerRole/PractitionerRole-HazelSmithKingstonPathology-Example*/.specialty[0]

issue

OperationOutcome Line of Issue: 132

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: TerminologyEngine

OperationOutcome Message ID: Terminology_TX_NoValid_3_CC

severity: Information

code: Invalid Code

details: None of the codings provided are in the value set 'Practice Setting Code Value Set' (http://hl7.org/fhir/ValueSet/c80-practice-codes|4.0.1), and a coding is recommended to come from this value set (codes = https://fhir.hl7.org.uk/CodeSystem/UKCore-PracticeSettingCode#820)

expression: Bundle.entry[2].resource/*PractitionerRole/PractitionerRole-JamesTaylorKingstonPathology-Example*/.specialty[0]

issue

OperationOutcome Line of Issue: 184

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: TerminologyEngine

OperationOutcome Message ID: Terminology_TX_NoValid_3_CC

severity: Information

code: Invalid Code

details: None of the codings provided are in the value set 'Practice Setting Code Value Set' (http://hl7.org/fhir/ValueSet/c80-practice-codes|4.0.1), and a coding is recommended to come from this value set (codes = https://fhir.hl7.org.uk/CodeSystem/UKCore-PracticeSettingCode#820)

expression: Bundle.entry[3].resource/*PractitionerRole/PractitionerRole-AnnaLaneKingstonPathology-Example*/.specialty[0]

issue

OperationOutcome Line of Issue: 476

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: TerminologyEngine

OperationOutcome Message ID: Terminology_TX_NoValid_3_CC

severity: Information

code: Invalid Code

details: None of the codings provided are in the value set 'Laboratory Order' (http://hl7.eu/fhir/laboratory/ValueSet/lab-orderCodes-eu-lab|0.1.1), and a coding is recommended to come from this value set (codes = https://fhir.nhs.uk/CodeSystem/England-GenomicTestDirectory#M119.5)

expression: Bundle.entry[8].resource.code

issue

OperationOutcome Line of Issue: 502

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: TerminologyEngine

OperationOutcome Message ID: Terminology_TX_NoValid_3_CC

severity: Information

code: Invalid Code

details: None of the codings provided are in the value set 'Genomic Condition Codes' (https://nw-gmsa.github.io/ValueSet/genomic-condition-codes|0.0.6), and a coding is recommended to come from this value set (codes = https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics#relapse)

expression: Bundle.entry[8].resource.reasonCode[0]

issue

OperationOutcome Line of Issue: 1

OperationOutcome Column of Issue: 2

OperationOutcome Source of Issue: InstanceValidator

OperationOutcome Message ID: Bundle_BUNDLE_Entry_NotFound

severity: Information

code: Not Found

details: Can't find 'https://api.service.nhs.uk/personal-demographics/FHIR/R4/Patient/9449307555' in the bundle (Bundle.entry[4].resource.link[0].other)

expression: Bundle

issue

OperationOutcome Line of Issue: 492

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: InstanceValidator

OperationOutcome Message ID: Details_for__matching_against_Profile_

severity: Information

code: Structural Issue

details: Details for PractitionerRole/PractitionerRole-HazelSmithKingstonPathology-Example matching against profile https://nw-gmsa.github.io/StructureDefinition/PractitionerRole|0.0.6

expression: Bundle.entry[8].resource.requester

issue

OperationOutcome Line of Issue: 326

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: TerminologyEngine

OperationOutcome Message ID: Error_validating_code_running_without_terminology_services

severity: Warning

code: Business Rule Violation

details: Unable to validate code '%' in system 'http://unitsofmeasure.org' because the validator is running without terminology services

expression: Bundle.entry[5].resource/*Observation/Observation-MultipleTumors-Example*/.value.ofType(Quantity)

issue

OperationOutcome Line of Issue: 375

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: TerminologyEngine

OperationOutcome Message ID: Error_validating_code_running_without_terminology_services

severity: Warning

code: Business Rule Violation

details: Unable to validate code '%' in system 'http://unitsofmeasure.org' because the validator is running without terminology services

expression: Bundle.entry[6].resource/*Observation/Observation-Necrosis-Example*/.value.ofType(Quantity)

issue

OperationOutcome Line of Issue: 575

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: TerminologyEngine

OperationOutcome Message ID: Terminology_TX_NoValid_2_CC

severity: Warning

code: Invalid Code

details: None of the codings provided are in the value set 'hl7VS-specimenCondition' (http://terminology.hl7.org/ValueSet/v2-0493|2.0.0), and a coding should come from this value set unless it has no suitable code (note that the validator cannot judge what is suitable) (codes = https://fhir.hl7.org.uk/CodeSystem/UKCore-BiopsyState#fresh-unfixed)

expression: Bundle.entry[9].resource/*Specimen/Specimen-CancerSolidTumor-Example*/.condition[0]

issue

OperationOutcome Line of Issue: 303

OperationOutcome Column of Issue: 6

OperationOutcome Source of Issue: InstanceValidator

OperationOutcome Message ID: All_observations_should_have_a_performer

severity: Warning

code: Invalid Content

details: Best Practice Recommendation: In general, all observations should have a performer

expression: Bundle.entry[5].resource/*Observation/Observation-MultipleTumors-Example*/

issue

OperationOutcome Line of Issue: 303

OperationOutcome Column of Issue: 6

OperationOutcome Source of Issue: InstanceValidator

OperationOutcome Message ID: All_observations_should_have_a_performer

severity: Warning

code: Invalid Content

details: Best Practice Recommendation: In general, all observations should have a performer

expression: Bundle.entry[5].resource

issue

OperationOutcome Line of Issue: 352

OperationOutcome Column of Issue: 6

OperationOutcome Source of Issue: InstanceValidator

OperationOutcome Message ID: All_observations_should_have_a_performer

severity: Warning

code: Invalid Content

details: Best Practice Recommendation: In general, all observations should have a performer

expression: Bundle.entry[6].resource/*Observation/Observation-Necrosis-Example*/

issue

OperationOutcome Line of Issue: 352

OperationOutcome Column of Issue: 6

OperationOutcome Source of Issue: InstanceValidator

OperationOutcome Message ID: All_observations_should_have_a_performer

severity: Warning

code: Invalid Content

details: Best Practice Recommendation: In general, all observations should have a performer

expression: Bundle.entry[6].resource

issue

OperationOutcome Line of Issue: 311

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: TerminologyEngine

severity: Warning

code: Not Found

details: A definition for CodeSystem 'http://snomed.info/sct' could not be found, so the code cannot be validated

expression: Bundle.entry[5].resource/*Observation/Observation-MultipleTumors-Example*/.code.coding[0].system

issue

OperationOutcome Line of Issue: 339

OperationOutcome Column of Issue: 10

OperationOutcome Source of Issue: TerminologyEngine

severity: Warning

code: Not Found

details: A definition for CodeSystem 'http://snomed.info/sct' could not be found, so the code cannot be validated

expression: Bundle.entry[5].resource/*Observation/Observation-MultipleTumors-Example*/.component[0].code.coding[0].system

issue

OperationOutcome Line of Issue: 360

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: TerminologyEngine

severity: Warning

code: Not Found

details: A definition for CodeSystem 'http://snomed.info/sct' could not be found, so the code cannot be validated

expression: Bundle.entry[6].resource/*Observation/Observation-Necrosis-Example*/.code.coding[0].system

issue

OperationOutcome Line of Issue: 420

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: TerminologyEngine

severity: Warning

code: Not Found

details: A definition for CodeSystem 'http://snomed.info/sct' could not be found, so the code cannot be validated

expression: Bundle.entry[7].resource/*Condition/Condition-LungTumor-Example*/.code.coding[0].system

issue

OperationOutcome Line of Issue: 476

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: TerminologyEngine

severity: Warning

code: Not Found

details: A definition for CodeSystem 'https://fhir.nhs.uk/CodeSystem/England-GenomicTestDirectory' version '9' could not be found, so the code cannot be validated. Valid versions: [0.0.6]

expression: Bundle.entry[8].resource/*ServiceRequest/ServiceRequest-NonWGSTestOrderForm-CancerSolidTumor-Example*/.code.coding[0].system

issue

OperationOutcome Line of Issue: 476

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: TerminologyEngine

severity: Warning

code: Not Found

details: A definition for CodeSystem 'https://fhir.nhs.uk/CodeSystem/England-GenomicTestDirectory' version '9' could not be found, so the code cannot be validated. Valid versions: [0.0.6]

expression: Bundle.entry[8].resource.code.coding[0].system

issue

OperationOutcome Line of Issue: 502

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: TerminologyEngine

severity: Warning

code: Not Found

details: A definition for CodeSystem 'https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics' could not be found, so the code cannot be validated

expression: Bundle.entry[8].resource/*ServiceRequest/ServiceRequest-NonWGSTestOrderForm-CancerSolidTumor-Example*/.reasonCode[0].coding[0].system

issue

OperationOutcome Line of Issue: 502

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: TerminologyEngine

severity: Warning

code: Not Found

details: A definition for CodeSystem 'https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics' could not be found, so the code cannot be validated

expression: Bundle.entry[8].resource.reasonCode[0].coding[0].system

issue

OperationOutcome Line of Issue: 540

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: TerminologyEngine

severity: Warning

code: Not Found

details: A definition for CodeSystem 'http://snomed.info/sct' could not be found, so the code cannot be validated

expression: Bundle.entry[9].resource/*Specimen/Specimen-CancerSolidTumor-Example*/.type.coding[0].system

issue

OperationOutcome Line of Issue: 593

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: TerminologyEngine

severity: Warning

code: Not Found

details: A definition for CodeSystem 'http://snomed.info/sct' could not be found, so the code cannot be validated

expression: Bundle.entry[10].resource/*BodyStructure/BodyStructure-BodySiteLocationLungs-Example*/.morphology.coding[0].system

issue

OperationOutcome Line of Issue: 600

OperationOutcome Column of Issue: 8

OperationOutcome Source of Issue: TerminologyEngine

severity: Warning

code: Not Found

details: A definition for CodeSystem 'http://snomed.info/sct' could not be found, so the code cannot be validated

expression: Bundle.entry[10].resource/*BodyStructure/BodyStructure-BodySiteLocationLungs-Example*/.location.coding[0].system