NHS North West Genomics
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Official URL: https://fhir.nwgenomics.nhs.uk/ImplementationGuide/fhir.nwgenomics.nhs.uk Version: 0.2.1
Draft as of 2026-02-20 Computable Name: NWGMSA

Overview

Diagnostic testing is essential to modern clinical care, offering objective information that supports decision-making at every stage of a patient’s journey—from initial evaluation to long-term monitoring and assessment of outcomes.

Genomic diagnostic testing contributes to this process by examining a patient’s DNA or RNA to detect genetic variations that influence disease susceptibility, diagnosis, treatment choices, and prognosis. By delivering highly specific and personalised insights, genomic testing improves the accuracy and effectiveness of clinical management.

NW Genomics Technical Overview

NHS North West Genomics is a new regional NHS service that consolidates clinical genomic testing across the North West of England. Although the service is delivered regionally, it also processes genomic test requests from across the UK. The service is hosted by Manchester University NHS Foundation Trust.

As part of the service transition, existing systems for electronic test ordering and reporting will be enhanced through the introduction of a Regional Integration Engine (RIE) and a Genomic Clinical Data Repository. These components enable seamless data exchange between local clinical systems and regional genomic laboratory services.

Design Overview

Standardising HL7-based Workflows

Although NW GMSA is hosted by Manchester University NHS Foundation Trust, it operates in practice as a distinct organisation. It has its own Trust Integration Engine (TIE), referred to as the Regional Integration Engine (RIE).

NW Genomics Technical Overview

At present, LIMS and EPR systems across the North West use a range of HL7 v2 Message based workflows, this remains the case with the RIE (centre and right of the above diagram). To reduce this variation, the IHE Laboratory Testing Workflow (LTW) profile and region-wide genomic messaging standards (HL7 v2.5.1 and FHIR R4) have been adopted. This standardisation applies to interactions between the NW GMSA Regional Integration Engine (RIE) and NHS Trust Integration Engines (TIEs). Interactions between LIMS and EPR systems, as well as the internal integration engine configurations within trusts, remain unchanged.

For external systems and NHS Trusts, NW Genomics LIMS will present as a single system with unified ordering and reporting interfaces. Direct point-to-point integrations between individual NHS Trust EPR systems and the NW LIMS will not be supported.

The NW Genomics HL7 v2 + FHIR specifications and the IHE LTW standards are detailed in this Implementation Guide.

In addition, NW Genomics is delivering a Genomic Clinical Repository (GCR) to support broader sharing of genomic test results across NHS Trusts, Integrated Care Systems (ICSs), and other Genomic Medicine Service Alliances (GMSAs). This GCR is populated by 'wire-taps' on existing workflows and solely HL7 FHIR R4 based plus IHE QEDm and MHD profiles to provide an additional layer of standardisation.

Genomic Document Sharing

Genomic Document Sharing is a proposed new capability within NW Genomics that leverages the existing NHS England National Record Locator (NRL). The solution is aligned with the IHE Mobile Health Document Sharing (MHDS) profile and so, follows a similar architectural approach to that used by the NHS England National Imaging Registry in its integration with the NRL.

NHS England NRL Design

For the initial phase, genomic reports will be published in PDF format. In later phases, the target format is the HL7 Europe Laboratory Report, aligning with the (anticipated) strategic direction for NHS England Pathology FHIR, which specifies FHIR-based pathology reporting.

How to Read this IG

Menu Item Description Audience
   Analysis and Design (Volume 1) Description of the processes and corresponding technical frameworks General
   Interfaces (Volume 2) Description of the processes and corresponding technical frameworks (HL7 v2 and FHIR Interactions) Detailed Technical (Integration Developer)
   Data Models (Volume 3) NHS North West Forms, Templates, Reports, and Compositions Data Modeling (Detailed Technical)
   Artefacts (Volume 4) NHS North West Common Data Models Detailed Technical
   Development Testing, Suppport and Architecture Detailed Technical (Developer)
Diagnostic Process Analysis and Design Interfaces Domain Archetype Domain Entity (Resources)
Data Contract
Workflow Management FHIR Workflow     Task
Laboratory Order Send Laboratory Order (IHE LTW) HL7 FHIR IHE LTW LAB-1 North West Genomics Test Order ServiceRequest
  Read & Search Laboratory Order (HIE) HL7 FHIR IHE QEDm PCC-44   Various Resource Profiles
Laboratory Report Laboratory Testing Workflow (LTW) HL7 FHIR IHE LAB-3 and HL7 v2 ORU LAB-3/R01 North West Genomics Test Report DiagnosticReport
  Inter Laboratory Workflow (ILW)      
  Send Laboratory Report Document (HIE) HL7 v2 MDM T02 North West Genomics Test Report DocumentReference
  Read & Search Laboratory Report Data (HIE) HL7 FHIR IHE QEDm PCC-44   Various Resource Profiles
  Read & Seerch Laboratory Report Documents (HIE) HL7 FHIR IHE MHD ITI-66 and ITI-67   DocumentReference
Specimen Collection Specimen Event Tracking (SET)     Specimen
Other Patient Administration HL7 FHIR IHE PDQm ITI-78   Patient
Encounter
  Authorisation (OAuth2 OAUth2 IHE IUA ITI-103 ITI-71 ITI-102    

SNOMED CT

UK edition of SNOMED (83821000000107)

Dependencies

IGPackageFHIRComment
.. NHS North West Genomicsfhir.nwgenomics.nhs.uk#0.2.1R4
... HL7 Terminology (THO)hl7.terminology.r4#7.0.1R4Automatically added as a dependency - all IGs depend on HL7 Terminology
.... FHIR Extensions Packhl7.fhir.uv.extensions.r4#5.2.0R4
... HL7 Europe Base and Core FHIR IGhl7.fhir.eu.base#2.0.0-ballotR4
.... International Patient Summary Implementation Guidehl7.fhir.uv.ips#2.0.0R4
..... HL7 Terminology (THO)hl7.terminology.r4#6.5.0R4
..... International Patient Accesshl7.fhir.uv.ipa#1.1.0R4
...... HL7 Terminology (THO)hl7.terminology.r4#6.2.0R4
...... SMART App Launchhl7.fhir.uv.smart-app-launch#2.0.0R4
.... FHIR Cross-Version Extensions package for FHIR R4 from FHIR R5hl7.fhir.uv.xver-r5.r4#0.0.1-snapshot-2R4
.... HL7 Europe Extensionshl7.fhir.eu.extensions.r4#1.2.0R4
.... Medication Prescription and Dispense (MPD)ihe.pharm.mpd.r4#1.0.0-comment-2R4
..... HL7 Terminology (THO)hl7.terminology.r4#6.3.0R4
... fhir.r4.ukcore.stu3.currentbuildfhir.r4.ukcore.stu3.currentbuild#0.0.19-pre-releaseR4
... Genomics Reporting Implementation Guidehl7.fhir.uv.genomics-reporting#3.0.0R4
.... HL7 Terminology (THO)hl7.terminology.r4#6.1.0R4
.... FHIR Extensions Packhl7.fhir.uv.extensions.r4#5.1.0R4
... HL7 Europe Laboratory Reporthl7.fhir.eu.laboratory#0.1.1R4
.... International Patient Summary Implementation Guidehl7.fhir.uv.ips#1.1.0R4
..... HL7 Terminology (THO)hl7.terminology.r4#5.0.0R4
..... fhir.dicomfhir.dicom#2022.4.20221006R4
... Structured Data Capturehl7.fhir.uv.sdc#3.0.0R4
... FHIR Tooling Extensions IGhl7.fhir.uv.tools.r4#0.9.0R4for example references

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This IG describes how an application acting on behalf of a patient can access information about the patient from an clinical records system using a FHIR based API. The clinical records system may be supporting a clinical care provider (e.g. a hospital, or a general practitioner), or a health data exchange, including a national health record system. (built Wed, Mar 19, 2025 14:34+0000+00:00)

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This guide lists the extensions specified for the European REALM. (built Fri, Dec 19, 2025 11:52+0100+01:00)

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UK Core FHIR profiles and Assets

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This IG defines the global extensions - the ones defined for everyone. These extensions are always in scope wherever FHIR is being used (built Sat, Apr 27, 2024 18:39+1000+10:00)

Package hl7.fhir.uv.genomics-reporting#3.0.0

Guidelines for reporting of clinical genomics results using HL7 FHIR. (built Thu, Dec 12, 2024 20:34+0000+00:00)

Package hl7.fhir.uv.ips#1.1.0

International Patient Summary (IPS) FHIR Implementation Guide (built Tue, Nov 22, 2022 03:24+0000+00:00)

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This guide describes how the Laboratory Report can be represented in the European REALM. (built Tue, Mar 25, 2025 12:00+0100+01:00)

Package hl7.fhir.uv.sdc#3.0.0

The SDC specification provides an infrastructure to standardize the capture and expanded use of patient-level data collected within an EHR.
This includes two components:
* Support more sophisticated questionnaire/form use-cases such as those needed for research, oncology, pathology and other clinical domains.
*Support pre-population and auto-population of EHR data into forms/questionnaires for uses outside direct clinical care (patient safety, adverse event reporting, public health reporting, etc.). (built Tue, Mar 8, 2022 18:32+0000+00:00)

Package hl7.fhir.uv.tools.r4#0.9.0

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Credits

Role(s) Contributor(s)
  North West Genomic Medicine Service Alliance
  Alder Hey Children's Hospital Trust
  Manchester University NHS Foundation Trust
  Liverpool Womens NHS Foundation Trust
  The Christie NHS Foundation Trust
  NHS England
Staff Engineer Kevin Mayfield, Aire Logic & Mayfield IS