North West Genomic Medicine Service Alliance
0.0.1 - ci-build
North West Genomic Medicine Service Alliance
0.0.1 - ci-build
DRAFT Implementation Guide
This is for collaboration and discussion purposes and is subject to change.
North West Genomic Medicine Service Alliance - Local Development build (v0.0.1) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions
| Draft as of 2025-06-19 |
<ValueSet xmlns="http://hl7.org/fhir">
<id value="specimen-type"/>
<text>
<status value="generated"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: ValueSet specimen-type</b></p><a name="specimen-type"> </a><a name="hcspecimen-type"> </a><p>This value set includes codes based on the following rules:</p><ul><li>Include these codes as defined in <a href="http://www.snomed.org/"><code>http://snomed.info/sct</code></a><table class="none"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href="http://snomed.info/id/119373006">119373006</a></td><td>Amniotic fluid specimen</td></tr><tr><td><a href="http://snomed.info/id/309201001">309201001</a></td><td>Ascitic fluid specimen</td></tr><tr><td><a href="http://snomed.info/id/258580003">258580003</a></td><td>Whole blood specimen</td></tr><tr><td><a href="http://snomed.info/id/122552005">122552005</a></td><td>Arterial blood specimen</td></tr><tr><td><a href="http://snomed.info/id/122556008">122556008</a></td><td>Cord blood specimen</td></tr><tr><td><a href="http://snomed.info/id/737357006">737357006</a></td><td>Fetal blood specimen</td></tr><tr><td><a href="http://snomed.info/id/122555007">122555007</a></td><td>Venous blood specimen</td></tr><tr><td><a href="http://snomed.info/id/440500007">440500007</a></td><td>Dried blood spot specimen</td></tr><tr><td><a href="http://snomed.info/id/119359002">119359002</a></td><td>Bone marrow specimen</td></tr><tr><td><a href="http://snomed.info/id/733104004">733104004</a></td><td>Swab from buccal mucosa</td></tr><tr><td><a href="http://snomed.info/id/258450006">258450006</a></td><td>Cerebrospinal fluid specimen</td></tr><tr><td><a href="http://snomed.info/id/258565009">258565009</a></td><td>Chorionic villi specimen</td></tr><tr><td><a href="http://snomed.info/id/702451000">702451000</a></td><td>Cultured cells substance</td></tr><tr><td><a href="http://snomed.info/id/309147000">309147000</a></td><td>Thyroid cyst fluid specimen</td></tr><tr><td><a href="http://snomed.info/id/258566005">258566005</a></td><td>Deoxyribonucleic acid specimen</td></tr><tr><td><a href="http://snomed.info/id/441652008">441652008</a></td><td>Formalin-fixed paraffin-embedded tissue specimen</td></tr><tr><td><a href="http://snomed.info/id/3040001000004100">3040001000004100</a></td><td>Paraffin embedded tissue block specimen</td></tr><tr><td><a href="http://snomed.info/id/1003517007">1003517007</a></td><td>Freeze dried specimen</td></tr><tr><td><a href="http://snomed.info/id/122571007">122571007</a></td><td>Pericardial fluid specimen</td></tr><tr><td><a href="http://snomed.info/id/418564007">418564007</a></td><td>Pleural fluid specimen</td></tr><tr><td><a href="http://snomed.info/id/119342007">119342007</a></td><td>Saliva specimen</td></tr><tr><td><a href="http://snomed.info/id/441479001">441479001</a></td><td>Fresh tissue specimen</td></tr><tr><td><a href="http://snomed.info/id/16214131000119100">16214131000119100</a></td><td>Frozen tissue section specimen</td></tr><tr><td><a href="http://snomed.info/id/122575003">122575003</a></td><td>Urine specimen</td></tr><tr><td><a href="http://snomed.info/id/441673008">441673008</a></td><td>Ribonucleic acid specimen (specimen)</td></tr></table></li><li>Include these codes as defined in <code>https://nw-gmsa.github.io/CodeSystem/nwgmsa</code><table class="none"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>CellPellet</td><td>Cell Pellet</td></tr><tr><td>LiquidBiopsy</td><td>Liquid Biopsy</td></tr><tr><td>FFPEShavings</td><td>FFPE - Shavings</td></tr><tr><td>FFPESlides</td><td>FFPE - Slides</td></tr><tr><td>FFPEPositivelyChargedSlides</td><td>FFPE - Positively Charged Slides</td></tr><tr><td>FFPEWaxBlock</td><td>FFPE - Wax block</td></tr></table></li></ul></div>
</text>
<url value="https://nw-gmsa.github.io/ValueSet/specimen-type"/>
<version value="0.0.1"/>
<name value="SpecimenType"/>
<title value="Specimen Type"/>
<status value="draft"/>
<experimental value="false"/>
<date value="2025-06-19T14:44:16+00:00"/>
<publisher value="NHS North West GMSA"/>
<contact>
<telecom>
<system value="url"/>
<value value="https://www.nw-gmsa.nhs.uk/contact-us"/>
</telecom>
</contact>
<description
value="A subset of [HL7 Europe Laboratory Report ValueSet: Specimen Types](https://build.fhir.org/ig/hl7-eu/laboratory/ValueSet-lab-specimenType-eu-lab.html)"/>
<jurisdiction>
<coding>
<system value="urn:iso:std:iso:3166"/>
<code value="GB"/>
<display value="United Kingdom of Great Britain and Northern Ireland"/>
</coding>
</jurisdiction>
<compose>
<include>
<system value="http://snomed.info/sct"/>
<concept>
<code value="119373006"/>
<display value="Amniotic fluid specimen"/>
</concept>
<concept>
<code value="309201001"/>
<display value="Ascitic fluid specimen"/>
</concept>
<concept>
<code value="258580003"/>
<display value="Whole blood specimen"/>
</concept>
<concept>
<code value="122552005"/>
<display value="Arterial blood specimen"/>
</concept>
<concept>
<code value="122556008"/>
<display value="Cord blood specimen"/>
</concept>
<concept>
<code value="737357006"/>
<display value="Fetal blood specimen"/>
</concept>
<concept>
<code value="122555007"/>
<display value="Venous blood specimen"/>
</concept>
<concept>
<code value="440500007"/>
<display value="Dried blood spot specimen"/>
</concept>
<concept>
<code value="119359002"/>
<display value="Bone marrow specimen"/>
</concept>
<concept>
<code value="733104004"/>
<display value="Swab from buccal mucosa"/>
</concept>
<concept>
<code value="258450006"/>
<display value="Cerebrospinal fluid specimen"/>
</concept>
<concept>
<code value="258565009"/>
<display value="Chorionic villi specimen"/>
</concept>
<concept>
<code value="702451000"/>
<display value="Cultured cells substance"/>
</concept>
<concept>
<code value="309147000"/>
<display value="Thyroid cyst fluid specimen"/>
</concept>
<concept>
<code value="258566005"/>
<display value="Deoxyribonucleic acid specimen"/>
</concept>
<concept>
<code value="441652008"/>
<display value="Formalin-fixed paraffin-embedded tissue specimen"/>
</concept>
<concept>
<code value="3040001000004100"/>
<display value="Paraffin embedded tissue block specimen"/>
</concept>
<concept>
<code value="1003517007"/>
<display value="Freeze dried specimen"/>
</concept>
<concept>
<code value="122571007"/>
<display value="Pericardial fluid specimen"/>
</concept>
<concept>
<code value="418564007"/>
<display value="Pleural fluid specimen"/>
</concept>
<concept>
<code value="119342007"/>
<display value="Saliva specimen"/>
</concept>
<concept>
<code value="441479001"/>
<display value="Fresh tissue specimen"/>
</concept>
<concept>
<code value="16214131000119100"/>
<display value="Frozen tissue section specimen"/>
</concept>
<concept>
<code value="122575003"/>
<display value="Urine specimen"/>
</concept>
<concept>
<code value="441673008"/>
<display value="Ribonucleic acid specimen (specimen)"/>
</concept>
</include>
<include>
<system value="https://nw-gmsa.github.io/CodeSystem/nwgmsa"/>
<concept>
<code value="CellPellet"/>
<display value="Cell Pellet"/>
</concept>
<concept>
<code value="LiquidBiopsy"/>
<display value="Liquid Biopsy"/>
</concept>
<concept>
<code value="FFPEShavings"/>
<display value="FFPE - Shavings"/>
</concept>
<concept>
<code value="FFPESlides"/>
<display value="FFPE - Slides"/>
</concept>
<concept>
<code value="FFPEPositivelyChargedSlides"/>
<display value="FFPE - Positively Charged Slides"/>
</concept>
<concept>
<code value="FFPEWaxBlock"/>
<display value="FFPE - Wax block"/>
</concept>
</include>
</compose>
</ValueSet>
IG © 2024+ NHS North West GMSA. Package nw-gmsa.github.io#0.0.1 based on FHIR 4.0.1. Generated 2025-06-19
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