North West Genomic Medicine Service Alliance - Local Development build (v0.0.1) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions
: Specimen Type - TTL Representation
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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
# - resource -------------------------------------------------------------------
a fhir:ValueSet ;
fhir:nodeRole fhir:treeRoot ;
fhir:id [ fhir:v "specimen-type"] ; #
fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: ValueSet specimen-type</b></p><a name=\"specimen-type\"> </a><a name=\"hcspecimen-type\"> </a><p>This value set includes codes based on the following rules:</p><ul><li>Include these codes as defined in <a href=\"http://www.snomed.org/\"><code>http://snomed.info/sct</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"http://snomed.info/id/119373006\">119373006</a></td><td>Amniotic fluid specimen</td></tr><tr><td><a href=\"http://snomed.info/id/309201001\">309201001</a></td><td>Ascitic fluid specimen</td></tr><tr><td><a href=\"http://snomed.info/id/258580003\">258580003</a></td><td>Whole blood specimen</td></tr><tr><td><a href=\"http://snomed.info/id/122552005\">122552005</a></td><td>Arterial blood specimen</td></tr><tr><td><a href=\"http://snomed.info/id/122556008\">122556008</a></td><td>Cord blood specimen</td></tr><tr><td><a href=\"http://snomed.info/id/737357006\">737357006</a></td><td>Fetal blood specimen</td></tr><tr><td><a href=\"http://snomed.info/id/122555007\">122555007</a></td><td>Venous blood specimen</td></tr><tr><td><a href=\"http://snomed.info/id/440500007\">440500007</a></td><td>Dried blood spot specimen</td></tr><tr><td><a href=\"http://snomed.info/id/119359002\">119359002</a></td><td>Bone marrow specimen</td></tr><tr><td><a href=\"http://snomed.info/id/733104004\">733104004</a></td><td>Swab from buccal mucosa</td></tr><tr><td><a href=\"http://snomed.info/id/258450006\">258450006</a></td><td>Cerebrospinal fluid specimen</td></tr><tr><td><a href=\"http://snomed.info/id/258565009\">258565009</a></td><td>Chorionic villi specimen</td></tr><tr><td><a href=\"http://snomed.info/id/702451000\">702451000</a></td><td>Cultured cells substance</td></tr><tr><td><a href=\"http://snomed.info/id/309147000\">309147000</a></td><td>Thyroid cyst fluid specimen</td></tr><tr><td><a href=\"http://snomed.info/id/258566005\">258566005</a></td><td>Deoxyribonucleic acid specimen</td></tr><tr><td><a href=\"http://snomed.info/id/441652008\">441652008</a></td><td>Formalin-fixed paraffin-embedded tissue specimen</td></tr><tr><td><a href=\"http://snomed.info/id/3040001000004100\">3040001000004100</a></td><td>Paraffin embedded tissue block specimen</td></tr><tr><td><a href=\"http://snomed.info/id/1003517007\">1003517007</a></td><td>Freeze dried specimen</td></tr><tr><td><a href=\"http://snomed.info/id/122571007\">122571007</a></td><td>Pericardial fluid specimen</td></tr><tr><td><a href=\"http://snomed.info/id/418564007\">418564007</a></td><td>Pleural fluid specimen</td></tr><tr><td><a href=\"http://snomed.info/id/119342007\">119342007</a></td><td>Saliva specimen</td></tr><tr><td><a href=\"http://snomed.info/id/441479001\">441479001</a></td><td>Fresh tissue specimen</td></tr><tr><td><a href=\"http://snomed.info/id/16214131000119100\">16214131000119100</a></td><td>Frozen tissue section specimen</td></tr><tr><td><a href=\"http://snomed.info/id/122575003\">122575003</a></td><td>Urine specimen</td></tr><tr><td><a href=\"http://snomed.info/id/441673008\">441673008</a></td><td>Ribonucleic acid specimen (specimen)</td></tr></table></li><li>Include these codes as defined in <code>https://nw-gmsa.github.io/CodeSystem/nwgmsa</code><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>CellPellet</td><td>Cell Pellet</td></tr><tr><td>LiquidBiopsy</td><td>Liquid Biopsy</td></tr><tr><td>FFPEShavings</td><td>FFPE - Shavings</td></tr><tr><td>FFPESlides</td><td>FFPE - Slides</td></tr><tr><td>FFPEPositivelyChargedSlides</td><td>FFPE - Positively Charged Slides</td></tr><tr><td>FFPEWaxBlock</td><td>FFPE - Wax block</td></tr></table></li></ul></div>"^^rdf:XMLLiteral
] ; #
fhir:url [ fhir:v "https://nw-gmsa.github.io/ValueSet/specimen-type"^^xsd:anyURI] ; #
fhir:version [ fhir:v "0.0.1"] ; #
fhir:name [ fhir:v "SpecimenType"] ; #
fhir:title [ fhir:v "Specimen Type"] ; #
fhir:status [ fhir:v "draft"] ; #
fhir:experimental [ fhir:v false] ; #
fhir:date [ fhir:v "2025-06-19T14:44:16+00:00"^^xsd:dateTime] ; #
fhir:publisher [ fhir:v "NHS North West GMSA"] ; #
fhir:contact ( [
( fhir:telecom [
fhir:system [ fhir:v "url" ] ;
fhir:value [ fhir:v "https://www.nw-gmsa.nhs.uk/contact-us" ] ] )
] ) ; #
fhir:description [ fhir:v "A subset of [HL7 Europe Laboratory Report ValueSet: Specimen Types](https://build.fhir.org/ig/hl7-eu/laboratory/ValueSet-lab-specimenType-eu-lab.html)"] ; #
fhir:jurisdiction ( [
( fhir:coding [
fhir:system [ fhir:v "urn:iso:std:iso:3166"^^xsd:anyURI ] ;
fhir:code [ fhir:v "GB" ] ;
fhir:display [ fhir:v "United Kingdom of Great Britain and Northern Ireland" ] ] )
] ) ; #
fhir:compose [
( fhir:include [
fhir:system [ fhir:v "http://snomed.info/sct"^^xsd:anyURI ] ;
( fhir:concept [
fhir:code [ fhir:v "119373006" ] ;
fhir:display [ fhir:v "Amniotic fluid specimen" ] ] [
fhir:code [ fhir:v "309201001" ] ;
fhir:display [ fhir:v "Ascitic fluid specimen" ] ] [
fhir:code [ fhir:v "258580003" ] ;
fhir:display [ fhir:v "Whole blood specimen" ] ] [
fhir:code [ fhir:v "122552005" ] ;
fhir:display [ fhir:v "Arterial blood specimen" ] ] [
fhir:code [ fhir:v "122556008" ] ;
fhir:display [ fhir:v "Cord blood specimen" ] ] [
fhir:code [ fhir:v "737357006" ] ;
fhir:display [ fhir:v "Fetal blood specimen" ] ] [
fhir:code [ fhir:v "122555007" ] ;
fhir:display [ fhir:v "Venous blood specimen" ] ] [
fhir:code [ fhir:v "440500007" ] ;
fhir:display [ fhir:v "Dried blood spot specimen" ] ] [
fhir:code [ fhir:v "119359002" ] ;
fhir:display [ fhir:v "Bone marrow specimen" ] ] [
fhir:code [ fhir:v "733104004" ] ;
fhir:display [ fhir:v "Swab from buccal mucosa" ] ] [
fhir:code [ fhir:v "258450006" ] ;
fhir:display [ fhir:v "Cerebrospinal fluid specimen" ] ] [
fhir:code [ fhir:v "258565009" ] ;
fhir:display [ fhir:v "Chorionic villi specimen" ] ] [
fhir:code [ fhir:v "702451000" ] ;
fhir:display [ fhir:v "Cultured cells substance" ] ] [
fhir:code [ fhir:v "309147000" ] ;
fhir:display [ fhir:v "Thyroid cyst fluid specimen" ] ] [
fhir:code [ fhir:v "258566005" ] ;
fhir:display [ fhir:v "Deoxyribonucleic acid specimen" ] ] [
fhir:code [ fhir:v "441652008" ] ;
fhir:display [ fhir:v "Formalin-fixed paraffin-embedded tissue specimen" ] ] [
fhir:code [ fhir:v "3040001000004100" ] ;
fhir:display [ fhir:v "Paraffin embedded tissue block specimen" ] ] [
fhir:code [ fhir:v "1003517007" ] ;
fhir:display [ fhir:v "Freeze dried specimen" ] ] [
fhir:code [ fhir:v "122571007" ] ;
fhir:display [ fhir:v "Pericardial fluid specimen" ] ] [
fhir:code [ fhir:v "418564007" ] ;
fhir:display [ fhir:v "Pleural fluid specimen" ] ] [
fhir:code [ fhir:v "119342007" ] ;
fhir:display [ fhir:v "Saliva specimen" ] ] [
fhir:code [ fhir:v "441479001" ] ;
fhir:display [ fhir:v "Fresh tissue specimen" ] ] [
fhir:code [ fhir:v "16214131000119100" ] ;
fhir:display [ fhir:v "Frozen tissue section specimen" ] ] [
fhir:code [ fhir:v "122575003" ] ;
fhir:display [ fhir:v "Urine specimen" ] ] [
fhir:code [ fhir:v "441673008" ] ;
fhir:display [ fhir:v "Ribonucleic acid specimen (specimen)" ] ] ) ] [
fhir:system [ fhir:v "https://nw-gmsa.github.io/CodeSystem/nwgmsa"^^xsd:anyURI ] ;
( fhir:concept [
fhir:code [ fhir:v "CellPellet" ] ;
fhir:display [ fhir:v "Cell Pellet" ] ] [
fhir:code [ fhir:v "LiquidBiopsy" ] ;
fhir:display [ fhir:v "Liquid Biopsy" ] ] [
fhir:code [ fhir:v "FFPEShavings" ] ;
fhir:display [ fhir:v "FFPE - Shavings" ] ] [
fhir:code [ fhir:v "FFPESlides" ] ;
fhir:display [ fhir:v "FFPE - Slides" ] ] [
fhir:code [ fhir:v "FFPEPositivelyChargedSlides" ] ;
fhir:display [ fhir:v "FFPE - Positively Charged Slides" ] ] [
fhir:code [ fhir:v "FFPEWaxBlock" ] ;
fhir:display [ fhir:v "FFPE - Wax block" ] ] ) ] )
] . #
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