NHS North West Genomics
2.2.0 - ci-build
NHS North West Genomics - Local Development build (v2.2.0) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions
Profile: Variant (Observation)
status: Final
category: Laboratory, Genetics
code: Genetic variant assessment
subject: Patient/example-patient
effective: 2026-08-15
performer: Organization/igene-laboratory
value: Present
method: Sequencing
component
code: Gene studied [ID]
value: BRCA1
component
code: Genomic source class [Type]
value: Germline
component
code: Genomic reference sequence [ID]
value: NC_000017.10
component
code: Genomic coordinate system [Type]
value: 1-based character counting
component
code: Genomic ref allele [ID]
value: TCT
component
code: Genomic alt allele [ID]
value: T
component
code: DNA change type
value: deletion
component
code: Transcript reference sequence [ID]
value: NM_007294.3
component
code: DNA change (c.HGVS)
value: NM_007294.3(BRCA1):c.68_69del
component
code: Amino acid change (pHGVS)
value: p.(Glu23ValfsTer17)
component
code: Genomic DNA change (gHGVS)
value: g.41276047_41276048del
component
code: Genetic variation clinical significance [Imp]
value: Pathogenic
component
code: Origin of germline genetic variant [Type]
value: Maternal
component
code: Genomic allele start-end
value: 41276046-?
component
code: Sample variant allelic frequency
value: 0.33 decimal
component
code: Allelic state
value: heterozygous