NHS North West Genomics
2.1.4 - ci-build United Kingdom flag

NHS North West Genomics - Local Development build (v2.1.4) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions

Table of Contents

.. 0 Table of Contents
... 1 Home
... 2 Laboratory Testing Workflow (LTW)
... 3 Inter Laboratory Workflow (ILW)
... 4 Health Data API (HIE/EURDICE)
... 5 API Security
... 6 Resource Access [IPA/QEDm]
... 7 Message Exchange [LTW/MQ]
... 8 Document Exchange [MHD]
... 9 Patient Identity Matching (PDQm)
... 10 Authorisation [IUA]
... 11 HL7 v2 Standards
... 12 Testing
... 13 Support
... 14 Overview - Data Contracts
... 15 ServiceRequest Introduction
... 16 DiagnosticReport Introduction
... 17 Laboratory Analyte Result Introduction
... 18 Architecture
... 19 Architecture - Enterprise Integration Patterns (EIP)
... 20 Diagnostic Core
... 21 Artifacts Summary
.... 21.1 Automation Manager
.... 21.2 Clinical Document
.... 21.3 Intermediary
.... 21.4 Order Filler
.... 21.5 Order Placer
.... 21.6 Order Result Tracker
.... 21.7 Patient Identity Source
.... 21.8 Provider Information Source
.... 21.9 Requestor (ILW)
.... 21.10 Subcontractor (ILW)
.... 21.11 CapabilityStatement for NW Genomics Genomic Data Platform (EURIDICE Health Data API)
.... 21.12 CapabilityStatement for NW GMSA Regional Orchestration Engine for Genomics
.... 21.13 Process Message
.... 21.14 Message Definition - Acknowledgement
.... 21.15 Message Definition - Document and Document Notification
.... 21.16 Message Definition - Laboratory Order
.... 21.17 Message Definition - Unsolicited Observation
.... 21.18 assigner
.... 21.19 Master HL7 genetic variant reporting panel
.... 21.20 North West Genomics Test Order
.... 21.21 North West Genomics Test Report
.... 21.22 AuditEvent
.... 21.23 Binary
.... 21.24 Bundle - FHIR Document
.... 21.25 Bundle - FHIR Messaging
.... 21.26 Composition Genomic Report
.... 21.27 Condition
.... 21.28 Diagnostic Implication (Observation)
.... 21.29 Diagnostic Report
.... 21.30 Document Message (MessageHeader)
.... 21.31 DocumentReference
.... 21.32 Encounter
.... 21.33 Event Notification (MessageHeader)
.... 21.34 FamilyMemberHistory
.... 21.35 Genomic Observation
.... 21.36 Genomic Study Panel
.... 21.37 Genotype (Observation)
.... 21.38 Haplotype (Observation)
.... 21.39 Hospital Spell
.... 21.40 Laboratory Analyte Result (Observation)
.... 21.41 Molecular Biomarker
.... 21.42 Observation
.... 21.43 Observation Order
.... 21.44 Observation Panel
.... 21.45 OperationOutcome
.... 21.46 Organization
.... 21.47 Patient
.... 21.48 Practitioner
.... 21.49 PractitionerRole
.... 21.50 Procedure
.... 21.51 Questionnaire
.... 21.52 QuestionnaireResponse
.... 21.53 RelatedPerson
.... 21.54 ServiceRequest
.... 21.55 Specimen
.... 21.56 Task
.... 21.57 Therapeutic Implication (Observation)
.... 21.58 Variant (Observation)
.... 21.59 Visit
.... 21.60 WorkOrder
.... 21.61 Attachment
.... 21.62 CodeableReference
.... 21.63 Correlation Identifier
.... 21.64 Genomics Pedigree Number
.... 21.65 GS1 Global Service Relation Number (GSRN)
.... 21.66 GS1 Serial Shipping Container Code (SSCC)
.... 21.67 GS1 Service Relation Instance Number (SRIN)
.... 21.68 Hospital Provider Spell Identifier
.... 21.69 Medical Record Number
.... 21.70 NHS Identifier
.... 21.71 Order Group Number
.... 21.72 Order Identifier
.... 21.73 Organisation Code
.... 21.74 Organisation Site Identifier
.... 21.75 Patient Identifier
.... 21.76 Practitioner Identifier
.... 21.77 Report Identifier
.... 21.78 Shipment Tracking Number
.... 21.79 Specimen Accession Number
.... 21.80 Visit Number
.... 21.81 ExtCodeableReference
.... 21.82 Admission Method
.... 21.83 Admission Source
.... 21.84 Discharge Destination
.... 21.85 Discharge Disposition
.... 21.86 DocumentEntry Class
.... 21.87 DocumentEntry mimeType
.... 21.88 DocumentEntry Type
.... 21.89 Ethnicity
.... 21.90 Facility Type
.... 21.91 Genomic Cancer Test Directory
.... 21.92 Genomic Clinical Indication Codes
.... 21.93 Genomic Disorder Carrier
.... 21.94 Genomic Finding
.... 21.95 Genomic Finding Detected
.... 21.96 Genomic Rare and Inherited Disease Test Directory
.... 21.97 Genomic Test Codes
.... 21.98 Genomic Test Outcome Codes
.... 21.99 NW IdentifierType
.... 21.100 Order Category
.... 21.101 Patient Encounter Trigger
.... 21.102 Patient Identity Trigger
.... 21.103 Practitioner Identifiers
.... 21.104 Pregnancy
.... 21.105 ReportType
.... 21.106 Request Priority
.... 21.107 Service
.... 21.108 Specialty
.... 21.109 Specimen Body Site
.... 21.110 Specimen Tracking Events
.... 21.111 Specimen Type
.... 21.112 UK National Health Identifiers
.... 21.113 Yes/No
.... 21.114 Yes/No/Unknown
.... 21.115 CodeSystem for Analyser
.... 21.116 CodeSystem not defined or to be determined
.... 21.117 iGene Codes
.... 21.118 iGene Sample Sub Type
.... 21.119 iGene Test Codes
.... 21.120 MFT EPIC Question Ids
.... 21.121 NHS England Genomic Clinical Indication Code
.... 21.122 NHS England Genomic Test Code
.... 21.123 NHS England Genomic Test Outcome Code
.... 21.124 North West Genomics Test Code
.... 21.125 NW GMSA Codes
.... 21.126 Task Input/Output Parameter Type
.... 21.127 UK National Health Identifiers
.... 21.128 UK Professional License
.... 21.129 GMC Number
.... 21.130 GMP Number
.... 21.131 NHS Number
.... 21.132 ODS Code
.... 21.133 ODS Site Code
.... 21.134 Sample Body Site (SNOMED) to iGene Specimen Sub Type
.... 21.135 Sample Type (SNOMED) to iGene Specimen Type
.... 21.136 Clinical and Genomic Workflow
.... 21.137 Collect Specimen - Biopsy Procedure for obtaining a specimen, part of a diagnostic pathway. Day case admission.
.... 21.138 Genomic Test Order Process including order entry and transmission of the order
.... 21.139 Genomic Test Report Process
.... 21.140 AuditEvent Mobile Query Existing Data [PCC-44]
.... 21.141 AuditEvent Placer Order Management [LAB-1] V2/FHIR/V2 Order
.... 21.142 Binary Sample PDF
.... 21.143 Bundle 'Event Message' - Patient Update
.... 21.144 Bundle 'Message' - Filler Order Message
.... 21.145 Bundle 'Message' - Genomics Order Reply
.... 21.146 Bundle 'Message' - Genomics Order Reply Acknowledgement
.... 21.147 Bundle 'Transaction' - Genomics Order Asynchronous Message Reply Acknowledgement
.... 21.148 Bundle - Conditions for a Patient QEDm
.... 21.149 Bundle - Form Search Results SDC
.... 21.150 Bundle - Genomic Diagnostic Implication for a Patient QEDm
.... 21.151 Bundle - Genomic Variant for a Patient QEDm
.... 21.152 Bundle - Genomic Variant Gene = NTHL1 QEDm
.... 21.153 Bundle - Patient Search Results by Medical Record Number PDQ
.... 21.154 Bundle - Patient Search Results by NHS Number PDQ
.... 21.155 Composition - Genomics Report ctDNA UGR
.... 21.156 Condition - Carcinoma
.... 21.157 Condition - Lynch Syndrome
.... 21.158 Consanguinity (type=CE)
.... 21.159 Diagnostic Report ctDNA Example
.... 21.160 Diagnostic Report Example.
.... 21.161 Discrete variation analysis overall interpretation - ctDNA
.... 21.162 Discrete variation analysis overall interpretation - ctDNA
.... 21.163 Discrete variation analysis overall interpretation - ctDNA Failed
.... 21.164 Document Reference Laboratory Report ctDNA
.... 21.165 Endpoint EPIC
.... 21.166 Endpoint iGene
.... 21.167 Endpoint RIE
.... 21.168 Example Document and Document Notification Message
.... 21.169 Example of a Message Acknowledgement
.... 21.170 Example of a Message Search
.... 21.171 FamilyMemberHistory - Ricky LEEDS
.... 21.172 FamilyMemberHistory - Sarah-Jane Nottingham
.... 21.173 FHIR RESTful POST ServiceRequest
.... 21.174 Genomic Report BRCA1 Variant Example
.... 21.175 Genomic Report Ovarian Carcinoma Diagnostic Implication Example
.... 21.176 Genomic Study (Panel) - Cystic Fibrosis
.... 21.177 Genomic Study (Panel) - Cystic Fibrosis Genetic Disease
.... 21.178 Genomic Study (Panel) - Lynch Syndrome
.... 21.179 Genomic Study (Panel) - Lynch Syndrome Genetic Disease
.... 21.180 Genomic Study Panel - ctDNA 431 Present
.... 21.181 Genomic Study Panel - ctDNA 971 Failed
.... 21.182 Laboratory Analyte Result - BCRABL
.... 21.183 Laboratory Analyte Result BCRABL Invalid Example
.... 21.184 Laboratory Analyte Result BCRABL Valid Example
.... 21.185 MCV - Mean corpuscular volume
.... 21.186 Message Header - Genomic Order ctDNA O21
.... 21.187 Message Header - Genomic Order ctDNA R01
.... 21.188 Message Header - Genomic Order Reply fatal
.... 21.189 Message Header - Genomic Order Reply fatal Acknowledgement
.... 21.190 Message Header - Genomic Order Reply Transient
.... 21.191 Message Header - Genomic Report
.... 21.192 Message Header - Patient
.... 21.193 Observation - Lynch Syndrome Mutation Finding
.... 21.194 Order Tracking Number (type=ST)
.... 21.195 Organization MANCHESTER UNIVERSITY NHS FOUNDATION TRUST
.... 21.196 Organization North West GMSA
.... 21.197 Output from a FHIR Validation
.... 21.198 Parameters Expansion Profile
.... 21.199 Patient - Birmingham
.... 21.200 Patient - Bolton
.... 21.201 Patient - Congleton
.... 21.202 Patient - Fetus London
.... 21.203 Patient - Lancaster
.... 21.204 Patient - London
.... 21.205 Patient - Ned Liverpool NHS Number: 9737383206
.... 21.206 Patient - Northwich
.... 21.207 Patient - Nottingham
.... 21.208 Patient - Rob Leeds NHS Number: 9737383222
.... 21.209 Patient - Sansa Manchester NHS Number: 9737383192
.... 21.210 Patient - Theon Sheffield NHS Number: 9737873858
.... 21.211 Patient - Warrington
.... 21.212 Patient - Wrexham
.... 21.213 PractitionerRole Result INTERPRETER
.... 21.214 Pregnancy Expected Delivery Date (type=DT)
.... 21.215 Procedure - Liver Biopsy
.... 21.216 RelatedPerson Birmingham-Lancaster
.... 21.217 RelatedPerson Birmingham-London
.... 21.218 RelatedPerson Lancaster-London
.... 21.219 RelatedPerson London-Lancaster
.... 21.220 RelatedPerson Mother Cersei London
.... 21.221 RelatedPerson Wrexham-Lancaster
.... 21.222 RelatedPerson Wrexham-London
.... 21.223 ServiceRequest ctDNA Example
.... 21.224 Specimen ctDNA Example
.... 21.225 Task Genomic Test Completed
.... 21.226 Task Genomic Test Requested
.... 21.227 Bundle 'Message' - Filler Order Message
.... 21.228 Bundle 'Message' - Genomics Order Reply
.... 21.229 Bundle 'Message' - Genomics Order with Attachment
.... 21.230 Bundle 'Message' - Genomics Order with Coded Entries
.... 21.231 Bundle 'SearchSet' - Genomics Order
.... 21.232 Document Reference Laboratory Order
.... 21.233 Encounter 'episode/stay' Example
.... 21.234 Message Header - Genomic Order
.... 21.235 Message Header - Genomic Order Reply ok
.... 21.236 Patient - OctaviaCHISLETT NHS Number: 9449305552
.... 21.237 PractitionerRole C3456789 Example
.... 21.238 ServiceRequest Attachment Example
.... 21.239 ServiceRequest Coded Entries Example
.... 21.240 Specimen Example
.... 21.241 Bundle 'Message' - Genomics Report
.... 21.242 Diagnostic Report Example.
.... 21.243 Document Reference Laboratory Report
.... 21.244 Message Header - Genomic Report
.... 21.245 Bundle 'Message' - Genomics Order ctDNA O21
.... 21.246 Bundle 'Message' - Genomics Report ctDNA R01
.... 21.247 Bundle `Document` - Genomics Report ctDNA
.... 21.248 Bundle `Document` - Genomics Report Inherited MMR deficiency (Lynch syndrome)
.... 21.249 Bundle `Document` - Genomics Report Targeted Variant
.... 21.250 Composition - Genomics Report LynchSyndrome
.... 21.251 Composition - Genomics Report Octavia CHISLETT
.... 21.252 DiagnosticImplication - Cystic Fibrosis Carrier
.... 21.253 DiagnosticImplication - Lynch Syndrome
.... 21.254 Genomic Study - Cystic Fibrosis
.... 21.255 Genomic Study - Lynch Syndrome
.... 21.256 Variant - CFTR
.... 21.257 Variant - NTHL1
.... 21.258 748683741
.... 21.259 EPIC-OBR-1 Example
.... 21.260 EPIC-OBX-10 Example
.... 21.261 EPIC-OBX-11 Example
.... 21.262 EPIC-OBX-2 Example
.... 21.263 EPIC-OBX-4 Example
.... 21.264 EPIC-OBX-6 Example
.... 21.265 EPIC-OBX-7 Example
.... 21.266 EPIC-OBX-8 Example
.... 21.267 Genomic Referral Category
.... 21.268 High infection risk sample
.... 21.269 Informed Consent
.... 21.270 OBX Pregnancy
.... 21.271 Supervising Clinician
.... 21.272 Bundle-Bundle-NonWGSTestOrderForm-Reanalysis-Example
.... 21.273 Bundle-NonWGSTestOrderForm-CancerSolidTumor-Example
.... 21.274 Bundle-NonWGSTestOrderForm-FetalScenario-Example
.... 21.275 NRL Genomic Report for Cersei LONDON (Test NHS Number 9737383230). Original order electronic from EPIC system
.... 21.276 NRL Genomic Report for Tommen BIRMINGHAM (Test NHS Number 9737383249). Original order not electronic