NHS North West Genomics
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Example Bundle: Shire Cytogenetics Report R01 - Future Structured Example (FISH)

Language: en

Bundle Shire2StructuredR01 of type message


Entry 1 - fullUrl = urn:uuid:45a1d9f7-aebc-4e5c-bc88-6a39632bc2af

Resource MessageHeader:

Language: en

event: event: R01 (ORU/ACK - Unsolicited transmission of an observation message)

Destinations

-Receiver
*Identifier: ODS Organisation Code/HODS

sender: Identifier: ODS Organisation Code/CPP

Sources

-Software
*NW GLH

focus: Diagnostic Report for 'Karyotype [Identifier] in Bone marrow Nominal' for '->NED LIVERPOOL Unknown, DoB: 1942-06-18 ( National Health Plan Identifier)'


Entry 2 - fullUrl = urn:uuid:52f677f9-6ab0-4a95-8b68-8b12762eedfb

Resource Patient:

Language: en

NED LIVERPOOL Unknown, DoB: 1942-06-18 ( National Health Plan Identifier)


Other Id:Patient internal identifier/00123456789

Entry 3 - fullUrl = urn:uuid:7b14e763-b7a6-49de-9686-2fcd0e1da322

Resource Observation:

Language: en

status: Final

category: Laboratory

code: Chromosome analysis result in ISCN expression

subject: NED LIVERPOOL Unknown, DoB: 1942-06-18 ( National Health Plan Identifier)

value: 48~50,XY,+X,-Y,-3,-6,-7,del(7)(q?31q36),+8,+11,add(12)(p11.2),+14,+15,-16,+19,+20,+22-,+1~2mar[cp10]

note:

48\R\50,XY,+X,-Y,-3,-6,-7,del(7)(q?31q36),+8,+11,add(12)(p11.2),+14,+15,-16,+19,+20,+22- ,+1\R\2mar[cp10] -Amendment 14/10/20


Entry 4 - fullUrl = urn:uuid:b6fedd0a-7cf6-4308-948e-5c9531ccda0d

Resource Observation:

Language: en

status: Final

category: Laboratory

code: Chromosome analysis panel by FISH

subject: NED LIVERPOOL Unknown, DoB: 1942-06-18 ( National Health Plan Identifier)

value: 7q deletion detected.

component

code: Interphase cells positive

value: 93 cells

component

code: Cells counted [#]

value: 100 cells


Entry 5 - fullUrl = urn:uuid:d54744fb-f490-44a1-90a0-1bfbce716fc5

Resource Observation:

Language: en

status: Final

category: Laboratory

code: Chromosome analysis master panel

subject: NED LIVERPOOL Unknown, DoB: 1942-06-18 ( National Health Plan Identifier)

hasMember:


Entry 6 - fullUrl = urn:uuid:2ebb9c8d-eb68-42cc-ab53-c07f55869788

Resource DiagnosticReport:

Language: en

Karyotype [Identifier] in Bone marrow Nominal (Genetics)

SubjectNED LIVERPOOL Unknown, DoB: 1942-06-18 ( National Health Plan Identifier)

Report Details

CodeValueFlags
Chromosome analysis master panelFinal

Complex abnormal hyperdiploid karyotype with gains of chromosomes 8 and 11, and loss of 7q and 12p which are recognised findings in myeloid neoplasms including AML